RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 NNTQ13423 1086 aa29.39■■■□□ 2.3
LIMD2-203ENST00000578067 DENND1BQ6P3S1 775 aa29.39■■■□□ 2.3
LIMD2-203ENST00000578067 SLC13A5Q86YT5 568 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-203ENST00000578067 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-203ENST00000578067 TMEM176AQ96HP8 235 aa29.39■■■□□ 2.3
LIMD2-203ENST00000578067 ELOVL4Q9GZR5 314 aa29.39■■■□□ 2.3
LIMD2-203ENST00000578067 FAM124BQ9H5Z6 455 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-203ENST00000578067 GABRQQ9UN88 632 aa29.39■■■□□ 2.3
LIMD2-203ENST00000578067 ERICH1Q86X53 443 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP29.38■■■□□ 2.29
LIMD2-203ENST00000578067 TRIB2Q92519 343 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 TWNKQ96RR1 684 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.38■■■□□ 2.29
LIMD2-203ENST00000578067 HES2Q9Y543 173 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 CITO14578 2027 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 TTI1O43156 1089 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 PTPN11Q06124 597 aaPredicted RBP29.38■■■□□ 2.29
LIMD2-203ENST00000578067 MYO1EQ12965 1108 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 CUL1Q13616 776 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 TRADDQ15628 312 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 GNASQ5JWF2 1037 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 ZMAT2Q96NC0 199 aaKnown RBP29.38■■■□□ 2.29
LIMD2-203ENST00000578067 CXCL16Q9H2A7 254 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 HMGXB4Q9UGU5 601 aa29.38■■■□□ 2.29
LIMD2-203ENST00000578067 PIN4Q9Y237 131 aaKnown RBP29.38■■■□□ 2.29
LIMD2-203ENST00000578067 TMEM88BA6NKF7 163 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 H3BQF6 201 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 PHF2O75151 1096 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 ZBTB6Q15916 424 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 TTC39CQ8N584 583 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 MTG1Q9BT17 334 aaPredicted RBP29.37■■■□□ 2.29
LIMD2-203ENST00000578067 NXF3Q9H4D5 531 aaKnown RBP29.37■■■□□ 2.29
LIMD2-203ENST00000578067 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.37■■■□□ 2.29
LIMD2-203ENST00000578067 IP6K2Q9UHH9 426 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 MTUS1Q9ULD2 1270 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 TCRBV5S1A1TA0A578 114 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 ALDH1A1P00352 501 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 MAN1A1P33908 653 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 ORC1Q13415 861 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 DNAJC24Q6P3W2 148 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 ALKAL1Q6UXT8 129 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 PAXIP1Q6ZW49 1069 aaPredicted RBP29.37■■■□□ 2.29
LIMD2-203ENST00000578067 PRELID2Q8N945 189 aa29.37■■■□□ 2.29
LIMD2-203ENST00000578067 CELF4Q9BZC1 486 aaKnown RBP29.37■■■□□ 2.29
LIMD2-203ENST00000578067 BARX2Q9UMQ3 279 aaPredicted RBP29.37■■■□□ 2.29
LIMD2-203ENST00000578067 TMEM191CA6NGB0 347 aa29.36■■■□□ 2.29
LIMD2-203ENST00000578067 GJB6O95452 261 aa29.36■■■□□ 2.29
LIMD2-203ENST00000578067 FLT3LGP49771 235 aa29.36■■■□□ 2.29
LIMD2-203ENST00000578067 INCA1Q0VD86 236 aa29.36■■■□□ 2.29
LIMD2-203ENST00000578067 BEST2Q8NFU1 509 aa29.36■■■□□ 2.29
LIMD2-203ENST00000578067 CNTN3Q9P232 1028 aa29.36■■■□□ 2.29
LIMD2-203ENST00000578067 LCMT1Q9UIC8 334 aa29.36■■■□□ 2.29
LIMD2-203ENST00000578067 RALGAPA2Q2PPJ7 1873 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 RECQL4O94761 1208 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 CHRNA3P32297 505 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 AARSP49588 968 aaKnown RBP eCLIP29.35■■■□□ 2.29
LIMD2-203ENST00000578067 DR1Q01658 176 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 TAP1Q03518 808 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 DHX34Q14147 1143 aaKnown RBP29.35■■■□□ 2.29
LIMD2-203ENST00000578067 TAF2Q6P1X5 1199 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 RHOT1Q8IXI2 618 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 ZDHHC14Q8IZN3 488 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 DDX27Q96GQ7 796 aaKnown RBP29.35■■■□□ 2.29
LIMD2-203ENST00000578067 STRIP2Q9ULQ0 834 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 UTP11Q9Y3A2 253 aaKnown RBP29.35■■■□□ 2.29
LIMD2-203ENST00000578067 PSTPIP1O43586 416 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 RPL7AP62424 266 aaKnown RBP29.35■■■□□ 2.29
LIMD2-203ENST00000578067 SMC1BQ8NDV3 1235 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 SEC14L1Q92503 715 aa29.35■■■□□ 2.29
LIMD2-203ENST00000578067 FAM153BP0C7A2 387 aa29.34■■■□□ 2.29
LIMD2-203ENST00000578067 VDRP11473 427 aa29.34■■■□□ 2.29
LIMD2-203ENST00000578067 FAM153CQ494X1 144 aa29.34■■■□□ 2.29
LIMD2-203ENST00000578067 CYP4F22Q6NT55 531 aa29.34■■■□□ 2.29
LIMD2-203ENST00000578067 MAGOHBQ96A72 148 aaKnown RBP29.34■■■□□ 2.29
LIMD2-203ENST00000578067 UPF3AQ9H1J1 476 aaKnown RBP29.34■■■□□ 2.29
LIMD2-203ENST00000578067 SPC25Q9HBM1 224 aa29.34■■■□□ 2.29
LIMD2-203ENST00000578067 FAM153AQ9UHL3 310 aa29.34■■■□□ 2.29
LIMD2-203ENST00000578067 FAM187AA6NFU0 413 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 GABPB1Q06547 395 aaPredicted RBP29.33■■■□□ 2.29
LIMD2-203ENST00000578067 HSP90B2PQ58FF3 399 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 PPP1R15BQ5SWA1 713 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 C3orf20Q8ND61 904 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 HEXIM2Q96MH2 286 aaKnown RBP29.33■■■□□ 2.29
LIMD2-203ENST00000578067 APOL6Q9BWW8 343 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 RAB17Q9H0T7 212 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 MED4Q9NPJ6 270 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 TUBGCP4Q9UGJ1 667 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 TRIP12Q14669 1992 aaPredicted RBP29.33■■■□□ 2.29
LIMD2-203ENST00000578067 TCRBV7S2A1N4TA0A589 114 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 FSCN2O14926 492 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 AKAP5P24588 427 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 NDST1P52848 882 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 HLTFQ14527 1009 aaKnown RBP eCLIP29.33■■■□□ 2.29
LIMD2-203ENST00000578067 CYP1B1Q16678 543 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 PTPN20Q4JDL3 420 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 UBXN11Q5T124 520 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 DAB2IPQ5VWQ8 1189 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 DCUN1D2Q6PH85 259 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 MCEEQ96PE7 176 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 CYTH4Q9UIA0 394 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms