RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 TFDP3Q5H9I0 405 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 MDH1BQ5I0G3 518 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 SNX30Q5VWJ9 437 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 XRRA1Q6P2D8 792 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 PRUNE1Q86TP1 453 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 CLEC10AQ8IUN9 316 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 BTBD10Q9BSF8 475 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 EML4Q9HC35 981 aaKnown RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 TAGLN3Q9UI15 199 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 BCS1LQ9Y276 419 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 STARD13Q9Y3M8 1113 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 UNC5CO95185 931 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 PTK6Q13882 451 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 ZMAT2Q96NC0 199 aaKnown RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 MRPL1Q9BYD6 325 aaKnown RBP10.86□□□□□ -0.67
PTPRM-205ENST00000577827 DCLK3Q9C098 648 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 PCDH9Q9HC56 1237 aa10.86□□□□□ -0.67
PTPRM-205ENST00000577827 PDGFRAP16234 1089 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 OVGP1Q12889 678 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CYTH1Q15438 398 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 SLC45A4Q5BKX6 768 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 LMBRD2Q68DH5 695 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 MARCH10Q8NA82 808 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 AGAP11Q8TF27 550 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 PPP2R3CQ969Q6 453 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 PAFAH2Q99487 392 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 MAGEB5Q9BZ81 275 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ZNF518BQ9C0D4 1074 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 IL17RBQ9NRM6 502 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 TOPORSQ9NS56 1045 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ABCF3Q9NUQ8 709 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 TBX20Q9UMR3 447 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 DTNAQ9Y4J8 743 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ANGPTL3Q9Y5C1 460 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 NCANO14594 1321 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 MYL2P10916 166 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CIITAP33076 1130 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 NFIXQ14938 502 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 DUPD1Q68J44 220 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CCNJLQ8IV13 435 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 SPDYE1Q8NFV5 336 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ZNF398Q8TD17 642 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 NIF3L1Q9GZT8 377 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 GANQ9H2C0 597 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 JPH1Q9HDC5 661 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 AVENQ9NQS1 362 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 LRRC4BQ9NT99 713 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CYP39A1Q9NYL5 469 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 RNF225M0QZC1 329 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 OATP04181 439 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 RARAP10276 462 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CASP2P42575 452 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CACNA2D1P54289 1103 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 AUHQ13825 339 aaKnown RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 EFHC2Q5JST6 749 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 LZICQ8WZA0 190 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ZBTB18Q99592 522 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 FAM118BQ9BPY3 351 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 NSMCE4AQ9NXX6 385 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 NINJ2Q9NZG7 142 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 PKD2L2Q9NZM6 624 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ZNF212Q9UDV6 495 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 SLC12A6Q9UHW9 1150 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 LIN7AO14910 233 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 EPHB6O15197 1021 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ATP9AO75110 1047 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 GLRA3O75311 464 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 GARTP22102 1010 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CNTFP26441 200 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 MMP13P45452 471 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CPA2P48052 419 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CUL2Q13617 745 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 RASA2Q15283 850 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CLEC16AQ2KHT3 1053 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CDC42EP5Q6NZY7 148 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 PRPF31Q8WWY3 499 aaKnown RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 HES6Q96HZ4 224 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 VCPIP1Q96JH7 1222 aa10.85□□□□□ -0.67
PTPRM-205ENST00000577827 CHORDC1Q9UHD1 332 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 MAGED2Q9UNF1 606 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-205ENST00000577827 ATP8B3O60423 1300 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 ABLIM1O14639 778 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 DNALI1O14645 258 aaPredicted RBP10.84□□□□□ -0.67
PTPRM-205ENST00000577827 PYGMP11217 842 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 SLC26A11Q86WA9 606 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 RNF169Q8NCN4 708 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 SLC20A1Q8WUM9 679 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 LPAR1Q92633 364 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTPRM-205ENST00000577827 TMEM120AQ9BXJ8 343 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 APOA4P06727 396 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 ACOT2P49753 483 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 MARSP56192 900 aaKnown RBP10.84□□□□□ -0.67
PTPRM-205ENST00000577827 RRP1BQ14684 758 aaKnown RBP10.84□□□□□ -0.67
PTPRM-205ENST00000577827 BOLA3Q53S33 107 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 METTL23Q86XA0 190 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 FBXO36Q8NEA4 188 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 TNFRSF25Q93038 417 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms