RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 DNAJC7Q99615 494 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 CHP1Q99653 195 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 C11orf84Q9BUA3 381 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 NAA15Q9BXJ9 866 aaKnown RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 APOBEC3GQ9HC16 384 aaKnown RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 UBE2TQ9NPD8 197 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 RAB20Q9NX57 234 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 CLEC1BQ9P126 229 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 IPPQ9Y573 584 aa10.82□□□□□ -0.68
CRLF3-202ENST00000577725 PDCD11Q14690 1871 aaKnown RBP10.82□□□□□ -0.68
CRLF3-202ENST00000577725 C5orf67F2Z3F1 127 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 GPR182O15218 404 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 PMM2O15305 246 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 GFPT2O94808 682 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 RPLP2P05387 115 aaKnown RBP10.81□□□□□ -0.68
CRLF3-202ENST00000577725 FECHP22830 423 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 ATXN1P54253 815 aaKnown RBP10.81□□□□□ -0.68
CRLF3-202ENST00000577725 MYL6P60660 151 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 NCOA4Q13772 614 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 DSC3Q14574 896 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 DRAP1Q14919 205 aaPredicted RBP10.81□□□□□ -0.68
CRLF3-202ENST00000577725 TMEM132DQ14C87 1099 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 SURF1Q15526 300 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 DUOXA2Q1HG44 320 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 SFMBT2Q5VUG0 894 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 TOGARAM2Q6ZUX3 1019 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 PPM1KQ8N3J5 372 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 RNF169Q8NCN4 708 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 KREMEN2Q8NCW0 462 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 CCDC112Q8NEF3 446 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 IQCDQ96DY2 449 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 ANKRD36BP1Q96IX9 119 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 KREMEN1Q96MU8 473 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 ZMAT2Q96NC0 199 aaKnown RBP10.81□□□□□ -0.68
CRLF3-202ENST00000577725 NT5C1BQ96P26 610 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 DESI2Q9BSY9 194 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 GPR88Q9GZN0 384 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 MFSD1Q9H3U5 465 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 APEX2Q9UBZ4 518 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 COQ4Q9Y3A0 265 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 PCDHB2Q9Y5E7 798 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 TET1Q8NFU7 2136 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 ASPMQ8IZT6 3477 aa10.81□□□□□ -0.68
CRLF3-202ENST00000577725 ESPNB1AK53 854 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 GRM6O15303 877 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 CAND2O75155 1236 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 CST3P01034 146 aaPredicted RBP10.8□□□□□ -0.68
CRLF3-202ENST00000577725 CALCAP01258 141 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 RB1P06400 928 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 KRT19P08727 400 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 CTNNB1P35222 781 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 YARSP54577 528 aaKnown RBP10.8□□□□□ -0.68
CRLF3-202ENST00000577725 JAM2P57087 298 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 MEA1Q16626 185 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 KYAT1Q16773 422 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
CRLF3-202ENST00000577725 CYP26C1Q6V0L0 522 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 SCARA5Q6ZMJ2 495 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 EFHBQ8N7U6 833 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 C1orf127Q8N9H9 656 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 ACRBPQ8NEB7 543 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 HELQQ8TDG4 1101 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 LINC01599Q8WXQ3 324 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 C18orf25Q96B23 403 aaPredicted RBP10.8□□□□□ -0.68
CRLF3-202ENST00000577725 ARID3AQ99856 593 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 ADAM2Q99965 735 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 EDEM3Q9BZQ6 932 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 FAM105AQ9NUU6 356 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 ZNHIT6Q9NWK9 470 aaKnown RBP10.8□□□□□ -0.68
CRLF3-202ENST00000577725 TRMT1Q9NXH9 659 aaKnown RBP10.8□□□□□ -0.68
CRLF3-202ENST00000577725 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 SIX4Q9UIU6 781 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 POLIQ9UNA4 740 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 SORCS3Q9UPU3 1222 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 FRYLO94915 3013 aa10.8□□□□□ -0.68
CRLF3-202ENST00000577725 SCN1AP35498 2009 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 SETXQ7Z333 2677 aaKnown RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 FAM170AA1A519 330 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 USP27XA6NNY8 438 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 F8VZ95 297 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 PPEF2O14830 753 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 NRDCO43847 1150 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ZMYND10O75800 440 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ITGB3P05106 788 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ITGA4P13612 1032 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ZSCAN20P17040 1043 aaPredicted RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 MSNP26038 577 aaKnown RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 POLR2BP30876 1174 aaKnown RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 EIF4A3P38919 411 aaKnown RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 USP8P40818 1118 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 AP3M2P53677 418 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 NOP14P78316 857 aaKnown RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 TRPC3Q13507 836 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 TDRD12Q587J7 1177 aaKnown RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 WDR44Q5JSH3 913 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 TMTC1Q8IUR5 882 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms