RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 MYO1EQ12965 1108 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 CENPPQ6IPU0 288 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 GUF1Q8N442 669 aaKnown RBP28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 ATAD1Q8NBU5 361 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 PLEKHO2Q8TD55 490 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 ZNF516Q92618 1163 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 HPDLQ96IR7 371 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 TIGD1Q96MW7 591 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 SMOC2Q9H3U7 446 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 TRAF3IP3Q9Y228 551 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 YIPF1Q9Y548 306 aa28.39■■■□□ 2.14
PPP4R1-204ENST00000577393 CALUO43852 315 aaPredicted RBP28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 ANP32AP39687 249 aaKnown RBP28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 CASP4P49662 377 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 SIGLEC14Q08ET2 396 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 SLC39A12Q504Y0 691 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 CHMP5Q9NZZ3 219 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 CEP72Q9P209 647 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 IGSF9Q9P2J2 1179 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 CDH7Q9ULB5 785 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 SLC27A5Q9Y2P5 690 aa28.38■■■□□ 2.13
PPP4R1-204ENST00000577393 TMEM221A6NGB7 291 aa28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 M0R296 226 aa28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 CST3P01034 146 aaPredicted RBP28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 LRRTM3Q86VH5 581 aa28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 UBALD2Q8IYN6 164 aa28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 ELMOD1Q8N336 334 aa28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 FGF13Q92913 245 aa28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 CORO1BQ9BR76 489 aa28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 AVENQ9NQS1 362 aaPredicted RBP28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 MRPS23Q9Y3D9 190 aaKnown RBP28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 ZFP37Q9Y6Q3 630 aaPredicted RBP28.37■■■□□ 2.13
PPP4R1-204ENST00000577393 GADD45BO75293 160 aaPredicted RBP28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 CDR1P51861 262 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 TDGQ13569 410 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 SLC5A9Q2M3M2 681 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 SMYD4Q8IYR2 804 aaPredicted RBP28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 TMEM86AQ8N2M4 240 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 TTC9BQ8N6N2 239 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 TOP6BLQ8N6T0 577 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 PARD3BQ8TEW8 1205 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 RSAD2Q8WXG1 361 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 ERCC4Q92889 916 aaPredicted RBP28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 ZNF512Q96ME7 567 aaPredicted RBP28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 RMND1Q9NWS8 449 aa28.36■■■□□ 2.13
PPP4R1-204ENST00000577393 SOWAHAQ2M3V2 549 aa28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 CEP135Q66GS9 1140 aa28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 IQCEQ6IPM2 695 aa28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 HFE2Q6ZVN8 426 aa28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 ING5Q8WYH8 240 aa28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 GSDMAQ96QA5 445 aa28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 DDX43Q9NXZ2 648 aaKnown RBP28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 PCDHA5Q9Y5H7 936 aa28.35■■■□□ 2.13
PPP4R1-204ENST00000577393 LRRIQ3A6PVS8 624 aaPredicted RBP28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 SMC2O95347 1197 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 PLD1Q13393 1074 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 NFIL3Q16649 462 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 LIMS2Q7Z4I7 341 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 OSTM1Q86WC4 334 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 NPAS3Q8IXF0 933 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 DCP1BQ8IZD4 617 aaKnown RBP28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 ADGRF2Q8IZF7 708 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 HS6ST3Q8IZP7 471 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 ST13P5Q8NFI4 369 aaPredicted RBP28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 SPATA18Q8TC71 538 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 NXPE3Q969Y0 559 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 ASIC4Q96FT7 647 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 HSFX1Q9UBD0 423 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 HOOK1Q9UJC3 728 aaKnown RBP28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 FRMD4BQ9Y2L6 1034 aa28.34■■■□□ 2.13
PPP4R1-204ENST00000577393 ANHXE9PGG2 379 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 SOAT2O75908 522 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 COL9A1P20849 921 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 NR2F2P24468 414 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 ALDH1A3P47895 512 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 EPHB3P54753 998 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 CLDN10P78369 228 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 MYL7Q01449 175 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 TSPY1Q01534 308 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 SMARCB1Q12824 385 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 PRSS36Q5K4E3 855 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 DPH6Q7L8W6 267 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 SPATA20Q8TB22 786 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 SMARCE1Q969G3 411 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 ACBD6Q9BR61 282 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 DNAJC25Q9H1X3 360 aa28.33■■■□□ 2.13
PPP4R1-204ENST00000577393 GABRDO14764 452 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 PHACTR2O75167 634 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 ACAT1P24752 427 aaKnown RBP28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 LHX1P48742 406 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 AP3M2P53677 418 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 DLG4P78352 724 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 TRPC3Q13507 836 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 HTR4Q13639 388 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 CYP4A22Q5TCH4 519 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 ZNF658Q5TYW1 1059 aaPredicted RBP28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 PDZD4Q76G19 769 aaPredicted RBP28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 BMP8AQ7Z5Y6 402 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 ELOA2Q8IYF1 753 aaPredicted RBP28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 SLC44A3Q8N4M1 653 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms