RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-205ENST00000577241 TSPY1Q01534 308 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 STIM1Q13586 685 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 CEP135Q66GS9 1140 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 IQCEQ6IPM2 695 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 INTS8Q75QN2 995 aaKnown RBP16.9■□□□□ 0.3
MSI2-205ENST00000577241 LEMD2Q8NC56 503 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 KHSRPQ92945 711 aaKnown RBP eCLIP16.9■□□□□ 0.3
MSI2-205ENST00000577241 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 TSG101Q99816 390 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 ACBD6Q9BR61 282 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 ZCWPW1Q9H0M4 648 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 AVENQ9NQS1 362 aaPredicted RBP16.9■□□□□ 0.3
MSI2-205ENST00000577241 IGSF9Q9P2J2 1179 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 SORCS3Q9UPU3 1222 aa16.9■□□□□ 0.3
MSI2-205ENST00000577241 MTCL1Q9Y4B5 1905 aaKnown RBP16.9■□□□□ 0.3
MSI2-205ENST00000577241 PHACTR2O75167 634 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 GADD45BO75293 160 aaPredicted RBP16.89■□□□□ 0.29
MSI2-205ENST00000577241 SEC24AO95486 1093 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 PCSK1P29120 753 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
MSI2-205ENST00000577241 ALDH1A3P47895 512 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 TUFMP49411 452 aaKnown RBP16.89■□□□□ 0.29
MSI2-205ENST00000577241 ADAM9Q13443 819 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 NFE2Q16621 373 aaPredicted RBP16.89■□□□□ 0.29
MSI2-205ENST00000577241 PTPN21Q16825 1174 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 PABPC1LQ4VXU2 614 aaKnown RBP16.89■□□□□ 0.29
MSI2-205ENST00000577241 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 SPPL2BQ8TCT7 592 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 EDAQ92838 391 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 SYAP1Q96A49 352 aaPredicted RBP16.89■□□□□ 0.29
MSI2-205ENST00000577241 ZNF512Q96ME7 567 aaPredicted RBP16.89■□□□□ 0.29
MSI2-205ENST00000577241 MKNK1Q9BUB5 465 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 EPS15L1Q9UBC2 864 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 LIMD1Q9UGP4 676 aa16.89■□□□□ 0.29
MSI2-205ENST00000577241 MTMR11A4FU01 709 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 ZNF197O14709 1029 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 CETN3O15182 167 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 GPR37L1O60883 481 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 OR4Q2P0C623 313 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 KRT13P13646 458 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 PRCPP42785 496 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 CASP4P49662 377 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 EPHB3P54753 998 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 DUSP4Q13115 394 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 BIRC3Q13489 604 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 MTMR3Q13615 1198 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 ZCWPW2Q504Y3 356 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 TMEM31Q5JXX7 168 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 GET4Q7L5D6 327 aaPredicted RBP16.88■□□□□ 0.29
MSI2-205ENST00000577241 UBALD2Q8IYN6 164 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 OR10T2Q8NGX3 314 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 FEZF2Q8TBJ5 459 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 DDX43Q9NXZ2 648 aaKnown RBP16.88■□□□□ 0.29
MSI2-205ENST00000577241 DNMT3BQ9UBC3 853 aaKnown RBP16.88■□□□□ 0.29
MSI2-205ENST00000577241 CDH7Q9ULB5 785 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 L1RE1Q9UN81 338 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 YIPF1Q9Y548 306 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 ASB3Q9Y575 518 aa16.88■□□□□ 0.29
MSI2-205ENST00000577241 LRRIQ3A6PVS8 624 aaPredicted RBP16.87■□□□□ 0.29
MSI2-205ENST00000577241 GABRDO14764 452 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 PSMA7O14818 248 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 MICAL2O94851 1124 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 CST3P01034 146 aaPredicted RBP16.87■□□□□ 0.29
MSI2-205ENST00000577241 RHOP08100 348 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 LAMP2P13473 410 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 VAMP7P51809 220 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 TNNC1P63316 161 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 ZXDAP98168 799 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 LRRC63Q05C16 580 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 TWF1Q12792 350 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 SOWAHAQ2M3V2 549 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 SLC39A12Q504Y0 691 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 CYP4A22Q5TCH4 519 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 CLEC17AQ6ZS10 378 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 LIMS2Q7Z4I7 341 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 FAM186BQ8IYM0 893 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 ZNF516Q92618 1163 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 PGLYRP2Q96PD5 576 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 MMS19Q96T76 1030 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 RTP3Q9BQQ7 232 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 GZF1Q9H116 711 aaPredicted RBP16.87■□□□□ 0.29
MSI2-205ENST00000577241 VRTNQ9H8Y1 702 aa16.87■□□□□ 0.29
MSI2-205ENST00000577241 MRPS23Q9Y3D9 190 aaKnown RBP16.87■□□□□ 0.29
MSI2-205ENST00000577241 TACC1O75410 805 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 AKAP3O75969 853 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 C4BPAP04003 597 aaKnown RBP16.86■□□□□ 0.29
MSI2-205ENST00000577241 P4HA1P13674 534 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 FKBP3Q00688 224 aaKnown RBP16.86■□□□□ 0.29
MSI2-205ENST00000577241 MAPRE1Q15691 268 aaKnown RBP16.86■□□□□ 0.29
MSI2-205ENST00000577241 WDR72Q3MJ13 1102 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 ITIH5Q86UX2 942 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 SMYD4Q8IYR2 804 aaPredicted RBP16.86■□□□□ 0.29
MSI2-205ENST00000577241 ADSSL1Q8N142 457 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 ATAD1Q8NBU5 361 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 TAF4BQ92750 862 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 DHTKD1Q96HY7 919 aaPredicted RBP16.86■□□□□ 0.29
MSI2-205ENST00000577241 FAM84AQ96KN4 292 aa16.86■□□□□ 0.29
MSI2-205ENST00000577241 MYADMQ96S97 322 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms