RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 TGM1P22735 817 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 GATA3P23771 443 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 ANXA11P50995 505 aaKnown RBP6.68□□□□□ -1.34
NUP88-213ENST00000576862 RPS7P62081 194 aaKnown RBP6.68□□□□□ -1.34
NUP88-213ENST00000576862 GRM3Q14832 879 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 SLC30A10Q6XR72 485 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 WDR75Q8IWA0 830 aaKnown RBP6.68□□□□□ -1.34
NUP88-213ENST00000576862 COLGALT2Q8IYK4 626 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 ADGRG5Q8IZF4 528 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 TMEM125Q96AQ2 219 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 Q96MF0 132 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 TTPALQ9BTX7 342 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 CNPPD1Q9BV87 410 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 SMOC2Q9H3U7 446 aa6.68□□□□□ -1.34
NUP88-213ENST00000576862 EPN1Q9Y6I3 576 aaPredicted RBP6.68□□□□□ -1.34
NUP88-213ENST00000576862 TRGV11A0A075B6L2 103 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 E7ENX8 843 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 M0QYG6 137 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 NPR1P16066 1061 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 PROZP22891 400 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 TAP1Q03518 808 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 TAP2Q03519 686 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 FPGSQ05932 587 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 FOXI1Q12951 378 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 BOP1Q14137 746 aaKnown RBP6.67□□□□□ -1.34
NUP88-213ENST00000576862 LLGL1Q15334 1064 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 GFOD2Q3B7J2 385 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 TAF2Q6P1X5 1199 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 MRGPRGQ86SM5 289 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 LCORLQ8N3X6 602 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 PSD4Q8NDX1 1056 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 SSH3Q8TE77 659 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 FBXO41Q8TF61 875 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 PTCD3Q96EY7 689 aaKnown RBP6.67□□□□□ -1.34
NUP88-213ENST00000576862 COQ10AQ96MF6 247 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 MRIQ9BWK5 157 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 IKZF4Q9H2S9 585 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 CYP4F11Q9HBI6 524 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 TBCCD1Q9NVR7 557 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 OBP2AQ9NY56 170 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 L1RE1Q9UN81 338 aa6.67□□□□□ -1.34
NUP88-213ENST00000576862 GOLGA6CA6NDK9 693 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 GOLGA6BA6NDN3 693 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 FAM227AF5H4B4 570 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 TOR1BO14657 336 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 VPS4BO75351 444 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 GOLGA6DP0CG33 693 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 HKR1P10072 659 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 PIM1P11309 404 aaPredicted RBP6.66□□□□□ -1.34
NUP88-213ENST00000576862 USP14P54578 494 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 INHBCP55103 352 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 GPSM2P81274 684 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 GALEQ14376 348 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 GBX1Q14549 363 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 HECTD2Q5U5R9 776 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 CYB5RLQ6IPT4 315 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 MAEAQ7L5Y9 396 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 CHST15Q7LFX5 561 aaPredicted RBP6.66□□□□□ -1.34
NUP88-213ENST00000576862 LNX2Q8N448 690 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 PCSK9Q8NBP7 692 aaKnown RBP6.66□□□□□ -1.34
NUP88-213ENST00000576862 DDX17Q92841 729 aaKnown RBP6.66□□□□□ -1.34
NUP88-213ENST00000576862 CHFRQ96EP1 664 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 P2RX7Q99572 595 aaKnown RBP6.66□□□□□ -1.34
NUP88-213ENST00000576862 SIK2Q9H0K1 926 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 GOLGA6AQ9NYA3 693 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 CHPF2Q9P2E5 772 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 TESQ9UGI8 421 aaKnown RBP6.66□□□□□ -1.34
NUP88-213ENST00000576862 MED16Q9Y2X0 877 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.66□□□□□ -1.34
NUP88-213ENST00000576862 MAST3O60307 1309 aa6.66□□□□□ -1.34
NUP88-213ENST00000576862 CAPN8A6NHC0 703 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 UNC5CO95185 931 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 KITP10721 976 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 ATF3P18847 181 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 CHRM3P20309 590 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 MPLP40238 635 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 ARFIP2P53365 341 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 SEC24CP53992 1094 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 TGFB2P61812 414 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 BLOC1S1P78537 153 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 COL10A1Q03692 680 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 FSTL1Q12841 308 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 HLXQ14774 488 aaPredicted RBP6.65□□□□□ -1.34
NUP88-213ENST00000576862 CNN3Q15417 329 aaKnown RBP6.65□□□□□ -1.34
NUP88-213ENST00000576862 FAM160B1Q5W0V3 765 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 MICALCLQ6ZW33 695 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 FAM46DQ8NEK8 389 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 IL31RAQ8NI17 732 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 C22orf23Q9BZE7 217 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 INTS13Q9NVM9 706 aa6.65□□□□□ -1.34
NUP88-213ENST00000576862 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.34
NUP88-213ENST00000576862 A0A1W2PPL8 197 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 PHGDHO43175 533 aaKnown RBP6.64□□□□□ -1.35
NUP88-213ENST00000576862 RAMP2O60895 175 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 GCP02774 474 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 SRGNP10124 158 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 KCNJ5P48544 419 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 SF3B3Q15393 1217 aaKnown RBP6.64□□□□□ -1.35
NUP88-213ENST00000576862 FAM9AQ8IZU1 332 aaPredicted RBP6.64□□□□□ -1.35
NUP88-213ENST00000576862 SLC44A3Q8N4M1 653 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms