RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NFIBO00712 420 aa18.77■□□□□ 0.59
ATPAF1-214ENST00000576409 GH1P01241 217 aa18.77■□□□□ 0.59
ATPAF1-214ENST00000576409 BGNP21810 368 aa18.77■□□□□ 0.59
ATPAF1-214ENST00000576409 STXBP2Q15833 593 aa18.77■□□□□ 0.59
ATPAF1-214ENST00000576409 EXOC3L1Q86VI1 746 aa18.77■□□□□ 0.59
ATPAF1-214ENST00000576409 SERPINI1Q99574 410 aa18.77■□□□□ 0.59
ATPAF1-214ENST00000576409 A8MUI8 341 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 ENTPD5O75356 428 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 GEMIN4P57678 1058 aaKnown RBP18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 PRAMEP78395 509 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 IRX1P78414 480 aaPredicted RBP18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 OTUD4Q01804 1114 aaKnown RBP18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 PPP1R2P3Q6NXS1 205 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 CLMNQ96JQ2 1002 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 MYLK2Q9H1R3 596 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 RPAP3Q9H6T3 665 aaPredicted RBP18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 PIH1D1Q9NWS0 290 aaKnown RBP18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 TCRBV7S2A1N4TA0A589 114 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 DGAT1O75907 488 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 GZMAP12544 262 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 CHKAP35790 457 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 PRKCEQ02156 737 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 PCDHAC2Q9Y5I4 1007 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 AGLP35573 1532 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 OSBPP22059 807 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 ADRA1DP25100 572 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 MRPS35P82673 323 aaKnown RBP18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 DEUP1Q05D60 604 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 PRPSAP1Q14558 356 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 TAF12Q16514 161 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 PREPLQ4J6C6 727 aaPredicted RBP18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 E2F7Q96AV8 911 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 SHISA4Q96DD7 197 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 GPATCH2LQ9NWQ4 482 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 WHRNQ9P202 907 aa18.76■□□□□ 0.59
ATPAF1-214ENST00000576409 CREB1P16220 341 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 VHLP40337 213 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 STX1BP61266 288 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 MREGQ8N565 214 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 PAFAH2Q99487 392 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 OLFML3Q9NRN5 406 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 DDX56Q9NY93 547 aaKnown RBP18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 ZNF711Q9Y462 761 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 CD302Q8IX05 232 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 DNPEPQ9ULA0 475 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 ACTR2P61160 394 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 ARSHQ5FYA8 562 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 TRIM67Q6ZTA4 783 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 SIX6OS1Q8N1H7 587 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 MIEF2Q96C03 454 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 PGBD4Q96DM1 585 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 TMA16Q96EY4 203 aaKnown RBP18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 RIT2Q99578 217 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 CYP26B1Q9NR63 512 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 FAM53CQ9NYF3 392 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 NOD1Q9Y239 953 aa18.75■□□□□ 0.59
ATPAF1-214ENST00000576409 SUPT3HO75486 399 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 KRT16P08779 473 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 PHEXP78562 749 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 CNGA3Q16281 694 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 ANO5Q75V66 913 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 RNF168Q8IYW5 571 aaPredicted RBP18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 TCP10LQ8TDR4 215 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 XAB2Q9HCS7 855 aaKnown RBP18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 FBXO40Q9UH90 709 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 RNF103-CHMP3A0A140T963 221 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 BANF1O75531 89 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 PYGBP11216 843 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 LCP1P13796 627 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 HHIPL2Q6UWX4 724 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 MFSD7Q6UXD7 560 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 C4orf50Q6ZRC1 276 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 SUGT1Q9Y2Z0 365 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 POLD1P28340 1107 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 ANKRD20A4Q4UJ75 823 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 ZNF662Q6ZS27 426 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 OTOP1Q7RTM1 612 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 GABPB2Q8TAK5 448 aaPredicted RBP18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 HERC5Q9UII4 1024 aaKnown RBP18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 AGAP1Q9UPQ3 857 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 SPATA31A1Q5TZJ5 1347 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 LGR5O75473 907 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 GHRP10912 638 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 SNX30Q5VWJ9 437 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 LRRC6Q86X45 466 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 POU5F2Q8N7G0 328 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 SIK2Q9H0K1 926 aa18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.74■□□□□ 0.59
ATPAF1-214ENST00000576409 SNRPAP09012 282 aaKnown RBP18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 PDGFRBP09619 1106 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 SERPINB3P29508 390 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 NUMBP49757 651 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 OLFML2BQ68BL8 750 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 DUPD1Q68J44 220 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 MRPL4Q9BYD3 311 aaKnown RBP18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 KCTD10Q9H3F6 313 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 ASTN1O14525 1302 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms