RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ELMSAN1Q6PJG2 1045 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 GLYCTKQ8IVS8 523 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 ADGRF2Q8IZF7 708 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 IMPG2Q9BZV3 1241 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 DNAJC25Q9H1X3 360 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 MMRN2Q9H8L6 949 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 PRDM6Q9NQX0 595 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 THEGQ9P2T0 379 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 FBXW11Q9UKB1 542 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 BARX2Q9UMQ3 279 aaPredicted RBP18.51■□□□□ 0.55
LITAF-212ENST00000573332 NFE2L3Q9Y4A8 694 aa18.51■□□□□ 0.55
LITAF-212ENST00000573332 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.51■□□□□ 0.55
LITAF-212ENST00000573332 WDR27A2RRH5 827 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 P4HA1P13674 534 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 ATF2P15336 505 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 WARSP23381 471 aaKnown RBP18.5■□□□□ 0.55
LITAF-212ENST00000573332 KCNH2Q12809 1159 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 GPR17Q13304 367 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 LEXMQ3ZCV2 418 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 SYCE2Q6PIF2 218 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 KREMEN2Q8NCW0 462 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 CCDC150Q8NCX0 1101 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 KBTBD7Q8WVZ9 684 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 MMS19Q96T76 1030 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 BPIFA3Q9BQP9 254 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 ACBD6Q9BR61 282 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 NAT10Q9H0A0 1025 aaKnown RBP18.5■□□□□ 0.55
LITAF-212ENST00000573332 ZCWPW1Q9H0M4 648 aa18.5■□□□□ 0.55
LITAF-212ENST00000573332 SYCE3A1L190 88 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 AFPP02771 609 aaKnown RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 KCNA5P22460 613 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 MYL7Q01449 175 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 MYL5Q02045 173 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 SMARCB1Q12824 385 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 UVSSAQ2YD98 709 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 EP400NLQ6ZTU2 488 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 OSTM1Q86WC4 334 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 CMASQ8NFW8 434 aaPredicted RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 OR10T2Q8NGX3 314 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 ATXN2LQ8WWM7 1075 aaKnown RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 SEMA4DQ92854 862 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 RHOBTB2Q9BYZ6 727 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 S1PR5Q9H228 398 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 MAN1C1Q9NR34 630 aa18.49■□□□□ 0.55
LITAF-212ENST00000573332 SAMSN1Q9NSI8 373 aaKnown RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 DDX43Q9NXZ2 648 aaKnown RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 NXF1Q9UBU9 619 aaKnown RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 AFF4Q9UHB7 1163 aaKnown RBP18.49■□□□□ 0.55
LITAF-212ENST00000573332 CPB1P15086 417 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 EEF1GP26641 437 aaKnown RBP18.48■□□□□ 0.55
LITAF-212ENST00000573332 PCSK1P29120 753 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 NOP14P78316 857 aaKnown RBP18.48■□□□□ 0.55
LITAF-212ENST00000573332 CETN1Q12798 172 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 AAK1Q2M2I8 961 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 ANO6Q4KMQ2 910 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 CDKAL1Q5VV42 579 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 CYP26C1Q6V0L0 522 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 TCEAL8Q8IYN2 117 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 SMRP1Q8NCR6 262 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 MRPL45Q9BRJ2 306 aaKnown RBP18.48■□□□□ 0.55
LITAF-212ENST00000573332 PI4K2AQ9BTU6 479 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 BCO2Q9BYV7 579 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 SFXN1Q9H9B4 322 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 APOBEC3GQ9HC16 384 aaKnown RBP18.48■□□□□ 0.55
LITAF-212ENST00000573332 ZDHHC7Q9NXF8 308 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 HSFX1Q9UBD0 423 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
LITAF-212ENST00000573332 CD207Q9UJ71 328 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 POLIQ9UNA4 740 aa18.48■□□□□ 0.55
LITAF-212ENST00000573332 H3BQ06 376 aaPredicted RBP18.47■□□□□ 0.55
LITAF-212ENST00000573332 LRRN2O75325 713 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 ZMYND10O75800 440 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 HOXA9P31269 272 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 ASPAP45381 313 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 MTIF2P46199 727 aaKnown RBP18.47■□□□□ 0.55
LITAF-212ENST00000573332 ARPP19P56211 112 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 ITIH3Q06033 890 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 NCAPHQ15003 741 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 MAN2A1Q16706 1144 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 PUS10Q3MIT2 529 aaKnown RBP18.47■□□□□ 0.55
LITAF-212ENST00000573332 WDR44Q5JSH3 913 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 SPOPLQ6IQ16 392 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 RNF19BQ6ZMZ0 732 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 CCDC149Q6ZUS6 474 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 DCP1BQ8IZD4 617 aaKnown RBP18.47■□□□□ 0.55
LITAF-212ENST00000573332 LMO3Q8TAP4 145 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 C2orf15Q8WU43 125 aaKnown RBP18.47■□□□□ 0.55
LITAF-212ENST00000573332 TMEM209Q96SK2 561 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 NIF3L1Q9GZT8 377 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 FAM124BQ9H5Z6 455 aaPredicted RBP18.47■□□□□ 0.55
LITAF-212ENST00000573332 CYP3A43Q9HB55 503 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 CDH9Q9ULB4 789 aa18.47■□□□□ 0.55
LITAF-212ENST00000573332 KCNJ18B7U540 433 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 POU2F2P09086 479 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 HNRNPA1P09651 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
LITAF-212ENST00000573332 OR4Q2P0C623 313 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 SPATA31D3P0C874 917 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 GNL1P36915 607 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms