RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 COL26A1Q96A83 441 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 SNX27Q96L92 541 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 FIZ1Q96SL8 496 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 CLSTN3Q9BQT9 956 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 HAPLN2Q9GZV7 340 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 PLEKHA5Q9HAU0 1116 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 ETNK1Q9HBU6 452 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
NUP88-205ENST00000572809 CNTN3Q9P232 1028 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 MYH11P35749 1972 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 TTC26A0AVF1 554 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 MYMKA6NI61 221 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 I3L4J1 428 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 PODXLO00592 558 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 HNRNPDLO14979 420 aaKnown RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 SPTLC2O15270 562 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 OGTO15294 1046 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 MEFVO15553 781 aaPredicted RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 RFPL2O75678 378 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 PIGRP01833 764 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 ZSCAN22P10073 491 aaPredicted RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 FGFR3P22607 806 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 OR1D2P34982 312 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 STAT6P42226 847 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 RAB33AQ14088 237 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 ZC2HC1CQ53FD0 456 aaPredicted RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 CCDC149Q6ZUS6 474 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 OTOP3Q7RTS5 596 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 ZDHHC14Q8IZN3 488 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 C3orf58Q8NDZ4 430 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 FEZF2Q8TBJ5 459 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 C18orf25Q96B23 403 aaPredicted RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 ACSF2Q96CM8 615 aaPredicted RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 RHOBTB2Q9BYZ6 727 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 ST6GALNAC4Q9H4F1 302 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 RPF1Q9H9Y2 349 aaKnown RBP8.09□□□□□ -1.11
NUP88-205ENST00000572809 PIDD1Q9HB75 910 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 ZDHHC7Q9NXF8 308 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 RAPGEFL1Q9UHV5 662 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 NUB1Q9Y5A7 615 aa8.09□□□□□ -1.11
NUP88-205ENST00000572809 A0A0B4J269 797 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 LACTBL1A8MY62 500 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 ANKRD63C9JTQ0 380 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 ADAM12O43184 909 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 ICMTO60725 284 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 ADRB2P07550 413 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 CXCL8P10145 99 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 GAP43P17677 238 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 CYP3A5P20815 502 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 TKTP29401 623 aaKnown RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 TNFSF9P41273 254 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 PPP2R3AQ06190 1150 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 SPAG1Q07617 926 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 SIGLEC14Q08ET2 396 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 ZBTB6Q15916 424 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 PTPN21Q16825 1174 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 UVSSAQ2YD98 709 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 FOXD4L6Q3SYB3 417 aaPredicted RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 SLFN12LQ6IEE8 588 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 FOXD4L3Q6VB84 417 aaPredicted RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 ANKS3Q6ZW76 656 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 BMP8AQ7Z5Y6 402 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 SFR1Q86XK3 245 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 CD302Q8IX05 232 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 PDILTQ8N807 584 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 TDRD5Q8NAT2 981 aaKnown RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 SMG7Q92540 1137 aaKnown RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 STAMQ92783 540 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 ZNF707Q96C28 371 aaPredicted RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 DNAJC19Q96DA6 116 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 MFSD14AQ96MC6 490 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 TSPAN18Q96SJ8 248 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 MKNK1Q9BUB5 465 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 MSTO1Q9BUK6 570 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 LRRC27Q9C0I9 530 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 MRPL44Q9H9J2 332 aaKnown RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 WDR6Q9NNW5 1121 aaKnown RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 TBC1D7Q9P0N9 293 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 MTRRQ9UBK8 725 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 SEL1LQ9UBV2 794 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 SORCS3Q9UPU3 1222 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 HCN4Q9Y3Q4 1203 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
NUP88-205ENST00000572809 BACE2Q9Y5Z0 518 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 CDY1Q9Y6F8 540 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 TRIP11Q15643 1979 aa8.08□□□□□ -1.12
NUP88-205ENST00000572809 A0A087X0B3 334 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 TMEM221A6NGB7 291 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 A6NJY4 79 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 H7C4K7 107 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 M0R296 226 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 SYN3O14994 580 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 XPOTO43592 962 aaKnown RBP8.07□□□□□ -1.12
NUP88-205ENST00000572809 FAM189A1O60320 539 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 CUTAO60888 179 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 PAPLNO95428 1278 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 YEATS4O95619 227 aa8.07□□□□□ -1.12
NUP88-205ENST00000572809 F13A1P00488 732 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms