RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 CNTD1Q8N815 330 aa4.51□□□□□ -1.69
CDC27-213ENST00000571643 HDAC10Q969S8 669 aa4.51□□□□□ -1.69
CDC27-213ENST00000571643 C11orf54Q9H0W9 315 aaPredicted RBP4.51□□□□□ -1.69
CDC27-213ENST00000571643 MKS1Q9NXB0 559 aa4.51□□□□□ -1.69
CDC27-213ENST00000571643 SLC23A1Q9UHI7 598 aa4.51□□□□□ -1.69
CDC27-213ENST00000571643 MRFAP1Q9Y605 127 aa4.51□□□□□ -1.69
CDC27-213ENST00000571643 ADAMTS13Q76LX8 1427 aa4.51□□□□□ -1.69
CDC27-213ENST00000571643 LRRC7Q96NW7 1537 aa4.51□□□□□ -1.69
CDC27-213ENST00000571643 MYOM2P54296 1465 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 CLSPNQ9HAW4 1339 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 IFT172Q9UG01 1749 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 DCCP43146 1447 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 ORC4O43929 436 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 MTHFD1P11586 935 aaKnown RBP4.5□□□□□ -1.69
CDC27-213ENST00000571643 ELLP55199 621 aaPredicted RBP4.5□□□□□ -1.69
CDC27-213ENST00000571643 CTXN1P60606 82 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 HSD11B2P80365 405 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 ATP8B2P98198 1209 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 CDC42EP1Q00587 391 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 RSPH3Q86UC2 560 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 RHOT1Q8IXI2 618 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 SLC44A3Q8N4M1 653 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 STON2Q8WXE9 905 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 ZNF764Q96H86 408 aaPredicted RBP4.5□□□□□ -1.69
CDC27-213ENST00000571643 ZSWIM1Q9BR11 485 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 CASS4Q9NQ75 786 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 TDP1Q9NUW8 608 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 FBXO34Q9NWN3 711 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 LRIT1Q9P2V4 623 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 RUVBL1Q9Y265 456 aaKnown RBP4.5□□□□□ -1.69
CDC27-213ENST00000571643 ATP8A1Q9Y2Q0 1164 aa4.5□□□□□ -1.69
CDC27-213ENST00000571643 NRXN1Q9ULB1 1477 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
CDC27-213ENST00000571643 KIAA0355O15063 1070 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 POU3F3P20264 500 aaPredicted RBP4.49□□□□□ -1.69
CDC27-213ENST00000571643 VAV2P52735 878 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 SCAPQ12770 1279 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 FOXI1Q12951 378 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 RAB39AQ14964 217 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 CYP2A13Q16696 494 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 Q6ZNX1 250 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 UBE3BQ7Z3V4 1068 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 RD3Q7Z3Z2 195 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 GPR149Q86SP6 731 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 DDX42Q86XP3 938 aaKnown RBP eCLIP4.49□□□□□ -1.69
CDC27-213ENST00000571643 AOPEPQ8N6M6 819 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 MORC4Q8TE76 937 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 NRG4Q8WWG1 115 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 Q96MF0 132 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 HEPHQ9BQS7 1158 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 DUSP26Q9BV47 211 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 TLK1Q9UKI8 766 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 STRCP1A6NGW2 1772 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 MSH6P52701 1360 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 ALKQ9UM73 1620 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 NRXN3Q9Y4C0 1643 aa4.49□□□□□ -1.69
CDC27-213ENST00000571643 XRN1Q8IZH2 1706 aaKnown RBP4.49□□□□□ -1.69
CDC27-213ENST00000571643 TECPR2O15040 1411 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 PIK3C2GO75747 1445 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 PTCH1Q13635 1447 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 FAM135BQ49AJ0 1406 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 CDHR4A6H8M9 788 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 KIAA0391O15091 583 aaKnown RBP4.48□□□□□ -1.69
CDC27-213ENST00000571643 NDUFS2O75306 463 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 C1RP00736 705 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 AMY1AP04745 511 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 SLC6A2P23975 617 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 IRX6P78412 446 aaPredicted RBP4.48□□□□□ -1.69
CDC27-213ENST00000571643 MRPS35P82673 323 aaKnown RBP4.48□□□□□ -1.69
CDC27-213ENST00000571643 CCDC142Q17RM4 750 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 PABPC1LQ4VXU2 614 aaKnown RBP4.48□□□□□ -1.69
CDC27-213ENST00000571643 SYDE2Q5VT97 1194 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 PGM2L1Q6PCE3 622 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 LNX2Q8N448 690 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 C1orf162Q8NEQ5 155 aaPredicted RBP4.48□□□□□ -1.69
CDC27-213ENST00000571643 OR2I1PQ8NGU4 316 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 VOPP1Q96AW1 172 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 TMX3Q96JJ7 454 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 BBC3Q96PG8 261 aaPredicted RBP4.48□□□□□ -1.69
CDC27-213ENST00000571643 MAN1C1Q9NR34 630 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 INTUQ9ULD6 942 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 KIAA1210Q9ULL0 1709 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 ABCC11Q96J66 1382 aa4.48□□□□□ -1.69
CDC27-213ENST00000571643 SETD1AO15047 1707 aaKnown RBP4.47□□□□□ -1.69
CDC27-213ENST00000571643 XIRP1Q702N8 1843 aaKnown RBP4.47□□□□□ -1.69
CDC27-213ENST00000571643 TRGV11A0A075B6L2 103 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 SHTN1A0MZ66 631 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 KLHL33A6NCF5 533 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 ALG1L2C9J202 215 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 ANXA1P04083 346 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 MPLP40238 635 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 ANAPC15P60006 121 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 MRPS21P82921 87 aaKnown RBP4.47□□□□□ -1.69
CDC27-213ENST00000571643 PIGFQ07326 219 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 ACAP2Q15057 778 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 INAVAQ3KP66 663 aa4.47□□□□□ -1.69
CDC27-213ENST00000571643 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms