RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 B3GNTL1Q67FW5 361 aaPredicted RBP5.21□□□□□ -1.58
NUP88-202ENST00000570937 ZBTB46Q86UZ6 589 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 FAM43AQ8N2R8 423 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 PRR18Q8N4B5 295 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 IL17RDQ8NFM7 739 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 STAG1Q8WVM7 1258 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 KAT5Q92993 513 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 CHFRQ96EP1 664 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 PCGF6Q9BYE7 350 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 GSTO2Q9H4Y5 243 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 DDX56Q9NY93 547 aaKnown RBP5.21□□□□□ -1.58
NUP88-202ENST00000570937 STRCP1A6NGW2 1772 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 PPLO60437 1756 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 PTCH1Q13635 1447 aa5.21□□□□□ -1.58
NUP88-202ENST00000570937 NRXN1Q9ULB1 1477 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 NRXN3Q9Y4C0 1643 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 PIPSLA2A3N6 862 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 GRID2IPA4D2P6 1211 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 KIAA0391O15091 583 aaKnown RBP5.2□□□□□ -1.58
NUP88-202ENST00000570937 B3GALT2O43825 422 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 CDKL5O76039 1030 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 HAUS5O94927 633 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 PDGFRBP09619 1106 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 FGFR4P22455 802 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 ZEB1P37275 1124 aaPredicted RBP5.2□□□□□ -1.58
NUP88-202ENST00000570937 FXR1P51114 621 aaKnown RBP eCLIP5.2□□□□□ -1.58
NUP88-202ENST00000570937 ZNF280AP59817 542 aaPredicted RBP5.2□□□□□ -1.58
NUP88-202ENST00000570937 MXRA7P84157 204 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 GUCY1B3Q02153 619 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 RESTQ13127 1097 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 LAIR1Q6GTX8 287 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 RAB24Q969Q5 203 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 BOD1Q96IK1 185 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 CLPTM1LQ96KA5 538 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 CEP89Q96ST8 783 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 IKZF4Q9H2S9 585 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 JKAMPQ9P055 326 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 KCNE5Q9UJ90 142 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 MAP3K2Q9Y2U5 619 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 PRAG1Q86YV5 1406 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 YTHDC2Q9H6S0 1430 aaKnown RBP5.2□□□□□ -1.58
NUP88-202ENST00000570937 ADGRL3Q9HAR2 1447 aa5.2□□□□□ -1.58
NUP88-202ENST00000570937 TONSLQ96HA7 1378 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 A0A087X1B8 175 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 CCDC78A2IDD5 438 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 CDHR4A6H8M9 788 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 GRM6O15303 877 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 RAMP2O60895 175 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 SLC43A1O75387 559 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 SBK3P0C264 359 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 VCAM1P19320 739 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 PDCP20941 246 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 AKAP5P24588 427 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 NOMO3P69849 1222 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 BLOC1S1P78537 153 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 SLFN5Q08AF3 891 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 NOMO2Q5JPE7 1267 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 ABHD17BQ5VST6 288 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 VRK3Q8IV63 474 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 LRRC59Q96AG4 307 aaKnown RBP5.19□□□□□ -1.58
NUP88-202ENST00000570937 PRAM1Q96QH2 718 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 MED15Q96RN5 788 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 SIN3AQ96ST3 1273 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 PNKPQ96T60 521 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 NUP88Q99567 741 aaPredicted RBP5.19□□□□□ -1.58
NUP88-202ENST00000570937 ZSWIM1Q9BR11 485 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 TTPALQ9BTX7 342 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 WDR11Q9BZH6 1224 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 MAN1C1Q9NR34 630 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 SYBUQ9NX95 663 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 SIDT1Q9NXL6 827 aaKnown RBP5.19□□□□□ -1.58
NUP88-202ENST00000570937 ANKFY1Q9P2R3 1169 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 LUC7L2Q9Y383 392 aaKnown RBP5.19□□□□□ -1.58
NUP88-202ENST00000570937 TECPR2O15040 1411 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 XRN1Q8IZH2 1706 aaKnown RBP5.19□□□□□ -1.58
NUP88-202ENST00000570937 LAMC1P11047 1609 aa5.19□□□□□ -1.58
NUP88-202ENST00000570937 EIF3AQ14152 1382 aaKnown RBP5.18□□□□□ -1.58
NUP88-202ENST00000570937 SLC16A6O15403 523 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 DTNBO60941 627 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 ALDH1L1O75891 902 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 SPDEFO95238 335 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 GPANK1O95872 356 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 FOSP01100 380 aaPredicted RBP5.18□□□□□ -1.58
NUP88-202ENST00000570937 POU2F2P09086 479 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 EGR2P11161 476 aaPredicted RBP5.18□□□□□ -1.58
NUP88-202ENST00000570937 TGM1P22735 817 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 CXADRP78310 365 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 SCAPQ12770 1279 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 TP53BP2Q13625 1128 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 SPDYE7PQ495Y7 208 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 Q6YL49 198 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 GADL1Q6ZQY3 521 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 USP45Q70EL2 814 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 BRINP3Q76B58 766 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 HSPBAP1Q96EW2 488 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 MARS2Q96GW9 593 aaKnown RBP5.18□□□□□ -1.58
NUP88-202ENST00000570937 COQ10AQ96MF6 247 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 TOR3AQ9H497 397 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms