RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PCBP1Q15365 356 aaKnown RBP eCLIP7.9□□□□□ -1.14
SMG6-205ENST00000570659 TSGA10IPQ3SY00 556 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 ARHGAP29Q52LW3 1261 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 TPGS2Q68CL5 300 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 CENPPQ6IPU0 288 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 ANO7Q6IWH7 933 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 CYP2U1Q7Z449 544 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 RASSF3Q86WH2 238 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 SYNPOQ8N3V7 929 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 CCDC33Q8N5R6 958 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 BPIFB1Q8TDL5 484 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 TNFRSF25Q93038 417 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 ERLEC1Q96DZ1 483 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 KIF12Q96FN5 646 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 SUSD3Q96L08 255 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 AGXT2Q9BYV1 514 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 TMEM60Q9H2L4 133 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 PTPRHQ9HD43 1115 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 PRMT7Q9NVM4 692 aaPredicted RBP7.9□□□□□ -1.14
SMG6-205ENST00000570659 EBF1Q9UH73 591 aa7.9□□□□□ -1.14
SMG6-205ENST00000570659 MYOFQ9NZM1 2061 aa7.9□□□□□ -1.15
SMG6-205ENST00000570659 ZNF638Q14966 1978 aaKnown RBP7.9□□□□□ -1.15
SMG6-205ENST00000570659 MGAQ8IWI9 3026 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 K7EQS6 105 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 SCAMP3O14828 347 aaKnown RBP7.89□□□□□ -1.15
SMG6-205ENST00000570659 SYN3O14994 580 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 CCNT1O60563 726 aaKnown RBP7.89□□□□□ -1.15
SMG6-205ENST00000570659 APBB3O95704 486 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 CPB1P15086 417 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 MCM2P49736 904 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 RCAN1P53805 252 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 PLD1Q13393 1074 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 ELF2Q15723 593 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 ZC2HC1CQ53FD0 456 aaPredicted RBP7.89□□□□□ -1.15
SMG6-205ENST00000570659 ATF7IP2Q5U623 682 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 EMC10Q5UCC4 262 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 SDHAF4Q5VUM1 108 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 TXNDC8Q6A555 127 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 IQCEQ6IPM2 695 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 CCNI2Q6ZMN8 369 aaPredicted RBP7.89□□□□□ -1.15
SMG6-205ENST00000570659 PIK3AP1Q6ZUJ8 805 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 SYT13Q7L8C5 426 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 LRRTM3Q86VH5 581 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 LURAP1LQ8IV03 231 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 HACE1Q8IYU2 909 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 CAMKK1Q8N5S9 505 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 CCDC148Q8NFR7 591 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 OLIG1Q8TAK6 271 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 BICD2Q8TD16 824 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 GIPC2Q8TF65 315 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 CCDC12Q8WUD4 166 aaPredicted RBP7.89□□□□□ -1.15
SMG6-205ENST00000570659 KCNB2Q92953 911 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 MSANTD3Q96H12 275 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 FAM20AQ96MK3 541 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 LINC00597Q9H2U6 94 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 ANKEF1Q9NU02 776 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 HCN2Q9UL51 889 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 PPME1Q9Y570 386 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 SNX14Q9Y5W7 946 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 WNT6Q9Y6F9 365 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 ANAPC1Q9H1A4 1944 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 ATMQ13315 3056 aa7.89□□□□□ -1.15
SMG6-205ENST00000570659 SCN1AP35498 2009 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 COL5A1P20908 1838 aaPredicted RBP7.88□□□□□ -1.15
SMG6-205ENST00000570659 SH3BP5O60239 455 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 GJB3O75712 270 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 RHOBTB1O94844 696 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 SEC24BO95487 1268 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 KRT10P13645 584 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 HMGA1P17096 107 aaKnown RBP7.88□□□□□ -1.15
SMG6-205ENST00000570659 ITPKBP27987 946 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 MCM4P33991 863 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 OPRD1P41143 372 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 GRM5P41594 1212 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 CLDN6P56747 220 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 SLC10A6Q3KNW5 377 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 C2orf27AQ580R0 203 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 PPP4R3AQ6IN85 833 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 ZNF280DQ6N043 979 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 OTUD6AQ7L8S5 288 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 NEK8Q86SG6 692 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 C12orf40Q86WS4 652 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 DAW1Q8N136 415 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 MAB21L3Q8N8X9 362 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 FAM200AQ8TCP9 573 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 USP33Q8TEY7 942 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 PSMG2Q969U7 264 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 FAM84AQ96KN4 292 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 PRIMPOLQ96LW4 560 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 JAKMIP1Q96N16 626 aaKnown RBP7.88□□□□□ -1.15
SMG6-205ENST00000570659 CYP2S1Q96SQ9 504 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 P2RY13Q9BPV8 354 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 TARS2Q9BW92 718 aaKnown RBP7.88□□□□□ -1.15
SMG6-205ENST00000570659 TASP1Q9H6P5 420 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 CAPN10Q9HC96 672 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 SH3GLB2Q9NR46 395 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 TMLHEQ9NVH6 421 aa7.88□□□□□ -1.15
SMG6-205ENST00000570659 TOR4AQ9NXH8 423 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms