RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 CLCNKBP51801 687 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 ARPP19P56211 112 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 OSTNP61366 133 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 GPC5P78333 572 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 HMGN5P82970 282 aaKnown RBP7.11□□□□□ -1.27
SMG6-204ENST00000570606 PRKCQQ04759 706 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 RAB33AQ14088 237 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 NAB2Q15742 525 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 UVSSAQ2YD98 709 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 NT5DC1Q5TFE4 455 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 TPRG1Q6ZUI0 275 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 ATCAYQ86WG3 371 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 C1orf210Q8IVY1 113 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 NPAS3Q8IXF0 933 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 CEP120Q8N960 986 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 CITED4Q96RK1 184 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 RPP25Q9BUL9 199 aaKnown RBP7.11□□□□□ -1.27
SMG6-204ENST00000570606 MRPL4Q9BYD3 311 aaKnown RBP7.11□□□□□ -1.27
SMG6-204ENST00000570606 CDT1Q9H211 546 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 FOXP1Q9H334 677 aaPredicted RBP7.11□□□□□ -1.27
SMG6-204ENST00000570606 POLD4Q9HCU8 107 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 DDX19AQ9NUU7 478 aaKnown RBP7.11□□□□□ -1.27
SMG6-204ENST00000570606 SLC38A7Q9NVC3 462 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 SPATA6Q9NWH7 488 aaPredicted RBP7.11□□□□□ -1.27
SMG6-204ENST00000570606 LRWD1Q9UFC0 647 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 KCNH3Q9ULD8 1083 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 LIMCH1Q9UPQ0 1083 aa7.11□□□□□ -1.27
SMG6-204ENST00000570606 MRPS23Q9Y3D9 190 aaKnown RBP7.11□□□□□ -1.27
SMG6-204ENST00000570606 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 TCHHQ07283 1943 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 SMIM28A0A1B0GU29 152 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 HIP1RO75146 1068 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 LRRN2O75325 713 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 GLULP15104 373 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 CEBPBP17676 345 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 MCM4P33991 863 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 MAGEA9P43362 315 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 NPTX2P47972 431 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 TRAPPC10P48553 1259 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 PEX3P56589 373 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 STARD6P59095 220 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 ROR1Q01973 937 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 NOLC1Q14978 699 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMG6-204ENST00000570606 ZRSR1Q15695 479 aaKnown RBP7.1□□□□□ -1.27
SMG6-204ENST00000570606 UPP1Q16831 310 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 SLC5A9Q2M3M2 681 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 SLC44A4Q53GD3 710 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 KRT79Q5XKE5 535 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 RTL10Q7L3V2 364 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 KIAA2013Q8IYS2 634 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 ELMOD1Q8N336 334 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 C3orf58Q8NDZ4 430 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 GIPC2Q8TF65 315 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 MCRS1Q96EZ8 462 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 DRC1Q96MC2 740 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 FAM129BQ96TA1 746 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 ACO2Q99798 780 aaKnown RBP7.1□□□□□ -1.27
SMG6-204ENST00000570606 CORO1BQ9BR76 489 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 LLPHQ9BRT6 129 aaKnown RBP7.1□□□□□ -1.27
SMG6-204ENST00000570606 TCHPQ9BT92 498 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 LTB4R2Q9NPC1 389 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 KMT5AQ9NQR1 393 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 GDE1Q9NZC3 331 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 DLGAP2Q9P1A6 1054 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 ANKFY1Q9P2R3 1169 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 DNMT3BQ9UBC3 853 aaKnown RBP7.1□□□□□ -1.27
SMG6-204ENST00000570606 TNFSF13BQ9Y275 285 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 NUB1Q9Y5A7 615 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 BACE2Q9Y5Z0 518 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 ANK1P16157 1881 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 RALGAPA1Q6GYQ0 2036 aa7.1□□□□□ -1.27
SMG6-204ENST00000570606 WDR27A2RRH5 827 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 FAM187AA6NFU0 413 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 FAM170BA6NMN3 283 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 E9PMD0 336 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 H7C4K7 107 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 SYN3O14994 580 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 ECI2O75521 394 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 MCF2P10911 925 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 CPB1P15086 417 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 CD72P21854 359 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 MATR3P43243 847 aaKnown RBP eCLIP7.09□□□□□ -1.27
SMG6-204ENST00000570606 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 CSTF1Q05048 431 aaKnown RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 SOX4Q06945 474 aaPredicted RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 POU4F2Q12837 409 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 STRN3Q13033 797 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 CTXN3Q4LDR2 81 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 WDR44Q5JSH3 913 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 SLC8B1Q6J4K2 584 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 ZNF280DQ6N043 979 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 MPZL3Q6UWV2 235 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 RSPO2Q6UXX9 243 aaPredicted RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 PDZD4Q76G19 769 aaPredicted RBP7.09□□□□□ -1.27
SMG6-204ENST00000570606 TRIM46Q7Z4K8 759 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 FBXO18Q8NFZ0 1043 aa7.09□□□□□ -1.27
SMG6-204ENST00000570606 RUBCNQ92622 972 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms