RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 FEZF2Q8TBJ5 459 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 URGCPQ8TCY9 931 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 ZNF606Q8WXB4 792 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 TMEM176AQ96HP8 235 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 THAP2Q9H0W7 228 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 STMN4Q9H169 189 aaPredicted RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 GIT1Q9Y2X7 761 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 ALG6Q9Y672 507 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 DCHS2Q6V1P9 2916 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 BUB1BO60566 1050 aaPredicted RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 FKTNO75072 461 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 CD58P19256 250 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 RPL9P32969 192 aaKnown RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 PURAQ00577 322 aaKnown RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 PTP4A2Q12974 167 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 MKRN4PQ13434 485 aaPredicted RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 BFSP2Q13515 415 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 SNX17Q15036 470 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 LMBRD2Q68DH5 695 aaPredicted RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 JADE1Q6IE81 842 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 CCDC50Q8IVM0 306 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 RCOR2Q8IZ40 523 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 C1orf131Q8NDD1 294 aaKnown RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 APPL2Q8NEU8 664 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 DNAJB3Q8WWF6 145 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 ZSWIM1Q9BR11 485 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.4□□□□□ -1.39
CYLD-216ENST00000569891 NENFQ9UMX5 172 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 HOXA2O43364 376 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 CYP1A1P04798 512 aaPredicted RBP6.39□□□□□ -1.39
CYLD-216ENST00000569891 CYBAP13498 195 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 ACTN2P35609 894 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 PTK7Q13308 1070 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 CNGA2Q16280 664 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 EEF1DP3Q658K8 133 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 DPY19L2P1Q6NXN4 242 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 PLEKHO2Q8TD55 490 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 HES6Q96HZ4 224 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 OSMRQ99650 979 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 PI4K2AQ9BTU6 479 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 HMX1Q9NP08 348 aaPredicted RBP6.39□□□□□ -1.39
CYLD-216ENST00000569891 SRRDQ9UH36 339 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 GJD2Q9UKL4 321 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 NOC2LQ9Y3T9 749 aaKnown RBP6.39□□□□□ -1.39
CYLD-216ENST00000569891 RCCD1A6NED2 376 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 PROSCO94903 275 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 TJP3O95049 919 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 ZRANB2O95218 330 aaKnown RBP eCLIP6.39□□□□□ -1.39
CYLD-216ENST00000569891 WEE2P0C1S8 567 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 FNTAP49354 379 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 MAPRE1Q15691 268 aaKnown RBP6.39□□□□□ -1.39
CYLD-216ENST00000569891 ALS2CLQ60I27 953 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 HAUS1Q96CS2 278 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 RNPC3Q96LT9 517 aaKnown RBP6.39□□□□□ -1.39
CYLD-216ENST00000569891 SYT11Q9BT88 431 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 FTHL17Q9BXU8 183 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 BCO2Q9BYV7 579 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 FOXP3Q9BZS1 431 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 KANSL3Q9P2N6 904 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 MYCNP04198 464 aaPredicted RBP6.39□□□□□ -1.39
CYLD-216ENST00000569891 KCNE1P15382 129 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 PCSK1P29120 753 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 LHX1P48742 406 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 DRP2Q13474 957 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 FBXO47Q5MNV8 452 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 CREG2Q8IUH2 290 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 RASGEF1CQ8N431 466 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 LRRC57Q8N9N7 239 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 C3orf20Q8ND61 904 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 OR5B17Q8NGF7 314 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 FNIP1Q8TF40 1166 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 SLC20A1Q8WUM9 679 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 SNX27Q96L92 541 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 C11orf70Q9BRQ4 267 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 MAK16Q9BXY0 300 aaKnown RBP6.39□□□□□ -1.39
CYLD-216ENST00000569891 GPR88Q9GZN0 384 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 SAGE1Q9NXZ1 904 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 CNTN3Q9P232 1028 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 HDAC6Q9UBN7 1215 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 NUB1Q9Y5A7 615 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 DUSP10Q9Y6W6 482 aa6.39□□□□□ -1.39
CYLD-216ENST00000569891 SMAPO00193 183 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 VNN1O95497 513 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 CLCN6P51797 869 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 NOMO3P69849 1222 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PPP1R7Q15435 360 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 GJC2Q5T442 439 aaPredicted RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 CC2D1AQ6P1N0 951 aaPredicted RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 FBXO38Q6PIJ6 1188 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 ZNF365Q70YC5 407 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 THEM5Q8N1Q8 247 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 TOP6BLQ8N6T0 577 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 ZNF516Q92618 1163 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 CPB2Q96IY4 423 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PACSIN1Q9BY11 444 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 IKZF4Q9H2S9 585 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 ADAMTS10Q9H324 1103 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 DDX20Q9UHI6 824 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms