RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 SPATA18Q8TC71 538 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 TMC2Q8TDI7 906 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 ACSF2Q96CM8 615 aaPredicted RBP11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 HPDLQ96IR7 371 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 TMEM209Q96SK2 561 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 ZCWPW1Q9H0M4 648 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 CRISPLD1Q9H336 500 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 MUTYHQ9UIF7 546 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 FRMD4BQ9Y2L6 1034 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 INSL5Q9Y5Q6 135 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 SNX9Q9Y5X1 595 aa11.91□□□□□ -0.5
SHCBP1-207ENST00000569702 MTMR11A4FU01 709 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 GABRDO14764 452 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 IKBKBO14920 756 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 HUS1O60921 280 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 RPL13P26373 211 aaKnown RBP11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 DLG4P78352 724 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 NTHL1P78549 312 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 DUSP4Q13115 394 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 ADAM9Q13443 819 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 SOWAHAQ2M3V2 549 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 C1orf220Q5T0J3 134 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 TDRD10Q5VZ19 366 aaKnown RBP11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 LRRTM3Q86VH5 581 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 ADSSL1Q8N142 457 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 PGLYRP2Q96PD5 576 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 NOTCH4Q99466 2003 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 XYLT2Q9H1B5 865 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 AVENQ9NQS1 362 aaPredicted RBP11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 EPS15L1Q9UBC2 864 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 DNMT3BQ9UBC3 853 aaKnown RBP11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 HSFX1Q9UBD0 423 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 MAN1B1Q9UKM7 699 aa11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 R3HCC1Q9Y3T6 440 aaKnown RBP11.9□□□□□ -0.5
SHCBP1-207ENST00000569702 DOCK8Q8NF50 2099 aa11.9□□□□□ -0.51
SHCBP1-207ENST00000569702 MYO10Q9HD67 2058 aa11.9□□□□□ -0.51
SHCBP1-207ENST00000569702 LRG1P02750 347 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 BMP6P22004 513 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 ATICP31939 592 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 PSMC2P35998 433 aaKnown RBP11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 MYL6P60660 151 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 SMARCB1Q12824 385 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 ZACNQ401N2 412 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 SLC39A12Q504Y0 691 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 INTS8Q75QN2 995 aaKnown RBP11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 OSTM1Q86WC4 334 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 ADGRF2Q8IZF7 708 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 ATAD1Q8NBU5 361 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 KBTBD7Q8WVZ9 684 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 MYADMQ96S97 322 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 PKMYT1Q99640 499 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 ACBD6Q9BR61 282 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 C1QTNF1Q9BXJ1 281 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 VRTNQ9H8Y1 702 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 C11orf16Q9NQ32 467 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 HCFC1R1Q9NWW0 138 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 CEP72Q9P209 647 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 LIMD1Q9UGP4 676 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 POLIQ9UNA4 740 aa11.89□□□□□ -0.51
SHCBP1-207ENST00000569702 VNN1O95497 513 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 RHOP08100 348 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 LAMP2P13473 410 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 CD44P16070 742 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 PTPN2P17706 415 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 FSHRP23945 695 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 GBP2P32456 591 aaPredicted RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 PPP1R2P41236 205 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 LHX1P48742 406 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 VAMP7P51809 220 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 PMS1P54277 932 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 TWF1Q12792 350 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 TRPC3Q13507 836 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 NCOA4Q13772 614 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 MORC3Q14149 939 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 WDR72Q3MJ13 1102 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 PABPC1LQ4VXU2 614 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 ANKRD40Q6AI12 368 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 ISM2Q6H9L7 571 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 SV2AQ7L0J3 742 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 GET4Q7L5D6 327 aaPredicted RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 FAM186BQ8IYM0 893 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 DCP1BQ8IZD4 617 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 TTC9BQ8N6N2 239 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 C2orf15Q8WU43 125 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 EDAQ92838 391 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 DHTKD1Q96HY7 919 aaPredicted RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 TMLHEQ9NVH6 421 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 DDX43Q9NXZ2 648 aaKnown RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 SLC27A5Q9Y2P5 690 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 YIPF1Q9Y548 306 aa11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 ZFP37Q9Y6Q3 630 aaPredicted RBP11.88□□□□□ -0.51
SHCBP1-207ENST00000569702 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
SHCBP1-207ENST00000569702 CETN3O15182 167 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms