RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TMEM191CA6NGB0 347 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZSCAN5CA6NGD5 496 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 LACTBL1A8MY62 500 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 H3BRB1 525 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 INO80B-WBP1J3KQ70 363 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 GPR25O00155 361 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TTI1O43156 1089 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 DAPK3O43293 454 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 PSTPIP1O43586 416 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SPOPO43791 374 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZEB2O60315 1214 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 RNF40O75150 1001 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 PPFIA2O75334 1257 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 IGHA2P01877 340 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TNNC2P02585 160 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 CALB1P05937 261 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 WEE2P0C1S8 567 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 IQCF3P0C7M6 154 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TMEM191BP0C7N4 346 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 STAG3L1P0CL83 205 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 RRM1P23921 792 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 GNA15P30679 374 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SCNN1AP37088 669 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 COILP38432 576 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SKOR1P84550 965 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF211Q13398 564 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TRPC3Q13507 836 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 MTMR3Q13615 1198 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ACVR2BQ13705 512 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 CCNG2Q16589 344 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 FAM110CQ1W6H9 321 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SEL1L2Q5TEA6 688 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 NAA35Q5VZE5 725 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 EEF1DP3Q658K8 133 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 LMBRD2Q68DH5 695 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF771Q7L3S4 317 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 GPR142Q7Z601 462 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZBTB33Q86T24 672 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 DPP9Q86TI2 863 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SAPCD2Q86UD0 394 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF410Q86VK4 478 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TRIM50Q86XT4 487 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 GSPT2Q8IYD1 628 aaKnown RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 KATNAL2Q8IYT4 538 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 RCOR2Q8IZ40 523 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 KIAA0319LQ8IZA0 1049 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 WDTC1Q8N5D0 677 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TMEM35BQ8NCS4 154 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 EXD1Q8NHP7 514 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 FEZF2Q8TBJ5 459 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 AFG1LQ8WV93 481 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TRAPPC12Q8WVT3 735 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 CLP1Q92989 425 aaKnown RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 MAGOHBQ96A72 148 aaKnown RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ANKRD36BP1Q96IX9 119 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 MAML3Q96JK9 1138 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 GDAP1L1Q96MZ0 367 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZIM3Q96PE6 472 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TSPAN18Q96SJ8 248 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 PARK7Q99497 189 aaKnown RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 PTPN18Q99952 460 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 BCO2Q9BYV7 579 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 INO80BQ9C086 356 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 CDT1Q9H211 546 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 TUT1Q9H6E5 874 aaKnown RBP5.72□□□□□ -1.49
SF3B3-213ENST00000569687 MINDY3Q9H8M7 445 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 PLEKHA5Q9HAU0 1116 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 PRDM10Q9NQV6 1147 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 CISHQ9NSE2 258 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 ZDHHC18Q9NUE0 388 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SLC5A4Q9NY91 659 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 PARP2Q9UGN5 583 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 IP6K2Q9UHH9 426 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 RABGEF1Q9UJ41 708 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 RASAL2Q9UJF2 1139 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SLC27A5Q9Y2P5 690 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 DERAQ9Y315 318 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 C2CD2Q9Y426 696 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 SCINQ9Y6U3 715 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 UMODL1Q5DID0 1318 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 MROH7Q68CQ1 1323 aa5.72□□□□□ -1.49
SF3B3-213ENST00000569687 A0A087WZ62 844 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 GOLGA6CA6NDK9 693 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SIGLEC16A6NMB1 481 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SRRM3A6NNA2 597 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 TMEM110-MUSTN1A8MSY1 372 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 HMGB1P1B2RPK0 211 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 MEFVO15553 781 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 THAP12O43422 761 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 MED7O43513 233 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SHOX2O60902 331 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ERLIN2O94905 339 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 CALCAP01258 141 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 GJB1P08034 283 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 GOLGA6DP0CG33 693 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SMPD1P17405 629 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ITIH2P19823 946 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 PTPN7P35236 360 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 HSD17B3P37058 310 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms