RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 SEMA4CQ9C0C4 833 aa4.52□□□□□ -1.69
UBR1-209ENST00000569243 MRFAP1Q9Y605 127 aa4.52□□□□□ -1.69
UBR1-209ENST00000569243 ZNF804BA4D1E1 1349 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 ERVV-2B6SEH9 535 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 TRIAP1O43715 76 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 URI1O94763 535 aaPredicted RBP4.51□□□□□ -1.69
UBR1-209ENST00000569243 CD1AP06126 327 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 ELFN1P0C7U0 828 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 C5AR1P21730 350 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 EDNRBP24530 442 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 FXR1P51114 621 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBR1-209ENST00000569243 ZNF280AP59817 542 aaPredicted RBP4.51□□□□□ -1.69
UBR1-209ENST00000569243 TCF15Q12870 199 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 FAM153CQ494X1 144 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 PREPLQ4J6C6 727 aaPredicted RBP4.51□□□□□ -1.69
UBR1-209ENST00000569243 PLAC9Q5JTB6 97 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 SYDE2Q5VT97 1194 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 TECPR1Q7Z6L1 1165 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 TMIEQ8NEW7 156 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 LRIG1Q96JA1 1093 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 CLPTM1LQ96KA5 538 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 TRIB1Q96RU8 372 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 HAPLN3Q96S86 360 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 IMPG2Q9BZV3 1241 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 SIK2Q9H0K1 926 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 MTMR4Q9NYA4 1195 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 LIMCH1Q9UPQ0 1083 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 PCDHB1Q9Y5F3 818 aa4.51□□□□□ -1.69
UBR1-209ENST00000569243 A0A0B4J269 797 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 TOR1BO14657 336 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 ARIH2O95376 493 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 PPP3CBP16298 524 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 LPOP22079 712 aaPredicted RBP4.5□□□□□ -1.69
UBR1-209ENST00000569243 NPTX2P47972 431 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 ADKP55263 362 aaKnown RBP4.5□□□□□ -1.69
UBR1-209ENST00000569243 SSBP2P81877 361 aaPredicted RBP4.5□□□□□ -1.69
UBR1-209ENST00000569243 SLC10A2Q12908 348 aaPredicted RBP4.5□□□□□ -1.69
UBR1-209ENST00000569243 EIF2B5Q13144 721 aaKnown RBP4.5□□□□□ -1.69
UBR1-209ENST00000569243 TUBB3Q13509 450 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 LLGL1Q15334 1064 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 TSTD2Q5T7W7 516 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 SUMO4Q6EEV6 95 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 TAPT1Q6NXT6 567 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 DDX42Q86XP3 938 aaKnown RBP eCLIP4.5□□□□□ -1.69
UBR1-209ENST00000569243 FAM9AQ8IZU1 332 aaPredicted RBP4.5□□□□□ -1.69
UBR1-209ENST00000569243 ZBTB8BQ8NAP8 495 aaPredicted RBP4.5□□□□□ -1.69
UBR1-209ENST00000569243 SLC17A8Q8NDX2 589 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 GPR35Q9HC97 309 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 CFAP97Q9P2B7 532 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 ATP8A1Q9Y2Q0 1164 aa4.5□□□□□ -1.69
UBR1-209ENST00000569243 FNDC1Q4ZHG4 1894 aaPredicted RBP4.49□□□□□ -1.69
UBR1-209ENST00000569243 ADGRA2Q96PE1 1338 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 SHTN1A0MZ66 631 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 CCDC154A6NI56 674 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 LINC00473A8K010 186 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 TTLL1O95922 423 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 HNRNPMP52272 730 aaKnown RBP eCLIP4.49□□□□□ -1.69
UBR1-209ENST00000569243 EXOSC10Q01780 885 aaKnown RBP4.49□□□□□ -1.69
UBR1-209ENST00000569243 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
UBR1-209ENST00000569243 ETFDHQ16134 617 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 TSHZ1Q6ZSZ6 1077 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 ADAMTS15Q8TE58 950 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 RFKQ969G6 155 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 SLC13A1Q9BZW2 595 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 BRD9Q9H8M2 597 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 SERTAD4Q9NUC0 356 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 EHD3Q9NZN3 535 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 POLHQ9Y253 713 aa4.49□□□□□ -1.69
UBR1-209ENST00000569243 LINC01548A6NM66 108 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 VWC2LB2RUY7 222 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 NT5C1B-RDH14C9J2C7 533 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 E9PLN8 166 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 F2RL2O00254 374 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 POLRMTO00411 1230 aaKnown RBP4.48□□□□□ -1.69
UBR1-209ENST00000569243 PCDHGA12O60330 932 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 CHRM2P08172 466 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 MALP21145 153 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 IARSP41252 1262 aaKnown RBP4.48□□□□□ -1.69
UBR1-209ENST00000569243 MC2RQ01718 297 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 IL10RAQ13651 578 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 BMPR2Q13873 1038 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 HABP2Q14520 560 aaPredicted RBP4.48□□□□□ -1.69
UBR1-209ENST00000569243 ACAP2Q15057 778 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 C3orf36Q3SXR2 165 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 CCDC93Q567U6 631 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 THEMIS2Q5TEJ8 643 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 DDX17Q92841 729 aaKnown RBP4.48□□□□□ -1.69
UBR1-209ENST00000569243 VKORC1Q9BQB6 163 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 CNPPD1Q9BV87 410 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 FAM126AQ9BYI3 521 aaPredicted RBP4.48□□□□□ -1.69
UBR1-209ENST00000569243 AMBRA1Q9C0C7 1298 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 SPC25Q9HBM1 224 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 ETAA1Q9NY74 926 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 ADAM21Q9UKJ8 722 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 SLC45A2Q9UMX9 530 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 PCDHGA9Q9Y5G4 932 aaKnown RBP4.48□□□□□ -1.69
UBR1-209ENST00000569243 PCDHGA8Q9Y5G5 932 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 PCDHGA7Q9Y5G6 932 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 PCDHGA6Q9Y5G7 932 aa4.48□□□□□ -1.69
UBR1-209ENST00000569243 PCDHGA3Q9Y5H0 932 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms