RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 PPP1R32Q7Z5V6 425 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 ZNF280BQ86YH2 543 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 SMAP1Q8IYB5 467 aaPredicted RBP6.87□□□□□ -1.31
UBR1-208ENST00000569066 SCAMP4Q969E2 229 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 MAGEH1Q9H213 219 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 AGO4Q9HCK5 861 aaKnown RBP6.87□□□□□ -1.31
UBR1-208ENST00000569066 POGKQ9P215 609 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 HDAC5Q9UQL6 1122 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 TMX2Q9Y320 296 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 NPC1O15118 1278 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 GNAT2P19087 354 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 ITGA8P53708 1063 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 ZNF354CQ86Y25 554 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 DNERQ8NFT8 737 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 SPSB4Q96A44 273 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 BORCS6Q96GS4 357 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 LRIG1Q96JA1 1093 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 GDF15Q99988 308 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 SMOC2Q9H3U7 446 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
UBR1-208ENST00000569066 AATKQ6ZMQ8 1374 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 MYO1CO00159 1063 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 DCLK1O15075 740 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 SKAP2O75563 359 aaPredicted RBP6.86□□□□□ -1.31
UBR1-208ENST00000569066 WDHD1O75717 1129 aaPredicted RBP6.86□□□□□ -1.31
UBR1-208ENST00000569066 TXNP10599 105 aaKnown RBP6.86□□□□□ -1.31
UBR1-208ENST00000569066 KLRC1P26715 233 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 POU6F2P78424 691 aaPredicted RBP6.86□□□□□ -1.31
UBR1-208ENST00000569066 TCERG1LQ5VWI1 586 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 FBXO38Q6PIJ6 1188 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 SLC30A10Q6XR72 485 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 ARHGEF18Q6ZSZ5 1173 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 DOK3Q7L591 496 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 VGLL2Q8N8G2 317 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 STYXQ8WUJ0 223 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 TBC1D20Q96BZ9 403 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 MARS2Q96GW9 593 aaKnown RBP6.86□□□□□ -1.31
UBR1-208ENST00000569066 SERHLQ9NQF3 203 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 ITM2CQ9NQX7 267 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 PNMA2Q9UL42 364 aa6.86□□□□□ -1.31
UBR1-208ENST00000569066 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.86□□□□□ -1.31
UBR1-208ENST00000569066 PRR5-ARHGAP8B1AHC4 643 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 LEFTY2O00292 366 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 THP07101 528 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 FDXRP22570 491 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 GABRB3P28472 473 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 KCNAB1Q14722 419 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 TAF5Q15542 800 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 EFCAB12Q6NXP0 572 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 JMJD6Q6NYC1 403 aaPredicted RBP6.85□□□□□ -1.31
UBR1-208ENST00000569066 CATSPERGQ6ZRH7 1159 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 BEND5Q7L4P6 421 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 FITM2Q8N6M3 262 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 SPATA5Q8NB90 893 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 OR52N2Q8NGI0 321 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 ZFP28Q8NHY6 868 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 RMDN3Q96TC7 470 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 PLA2G3Q9NZ20 509 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBR1-208ENST00000569066 PMS2P1A4D2B8 440 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
UBR1-208ENST00000569066 MBD3L3A6NE82 208 aaPredicted RBP6.85□□□□□ -1.31
UBR1-208ENST00000569066 CLCA1A8K7I4 914 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 M0R3H8 397 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 A1BGP04217 495 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 MSX2P35548 267 aaPredicted RBP6.85□□□□□ -1.31
UBR1-208ENST00000569066 KCNC1P48547 511 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 PPP2CBP62714 309 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 PPP2CAP67775 309 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 KIAA2012Q0VF49 1180 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 FOXL1Q12952 345 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 RAB30Q15771 203 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 ZACNQ401N2 412 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 PLA1AQ53H76 456 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 C1QL3Q5VWW1 255 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 FAM83AQ86UY5 434 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 ST8SIA2Q92186 375 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 NELL2Q99435 816 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 SPATA5L1Q9BVQ7 753 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■■■□ 26
UBR1-208ENST00000569066 C9orf78Q9NZ63 289 aaPredicted RBP6.85□□□□□ -1.31
UBR1-208ENST00000569066 ATP11BQ9Y2G3 1177 aa6.85□□□□□ -1.31
UBR1-208ENST00000569066 TRIM13O60858 407 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 IL1R2P27930 398 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 SPARCL1Q14515 664 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 POSTNQ15063 836 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 FCRL6Q6DN72 434 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 BORAQ6PGQ7 559 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 CFAP52Q8N1V2 620 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 SLC46A1Q96NT5 459 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 SLC38A3Q99624 504 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 DACT1Q9NYF0 836 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 HECAQ9UBI9 543 aaPredicted RBP6.84□□□□□ -1.31
UBR1-208ENST00000569066 PIP5K1BO14986 540 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 RAP1GAPP47736 663 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 ZNF134P52741 427 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 TIGD6Q17RP2 521 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 ZIK1Q3SY52 487 aaPredicted RBP6.84□□□□□ -1.31
UBR1-208ENST00000569066 CRTC1Q6UUV9 634 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 ZSWIM1Q9BR11 485 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms