RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 LEMD2Q8NC56 503 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 ING5Q8WYH8 240 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 FAM122AQ96E09 287 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 FAM84AQ96KN4 292 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 RPP25Q9BUL9 199 aaKnown RBP21.86■■□□□ 1.09
CLK3-225ENST00000569063 GDAP2Q9NXN4 497 aa21.86■■□□□ 1.09
CLK3-225ENST00000569063 PTPRJQ12913 1337 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 KRT19P08727 400 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 CYP2J2P51589 502 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 VCPP55072 806 aaKnown RBP21.85■■□□□ 1.09
CLK3-225ENST00000569063 SMARCB1Q12824 385 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 SLC39A12Q504Y0 691 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 IER5LQ5T953 404 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 PDZD4Q76G19 769 aaPredicted RBP21.85■■□□□ 1.09
CLK3-225ENST00000569063 RDH13Q8NBN7 331 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 KIAA0895Q8NCT3 520 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 OR5B17Q8NGF7 314 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 GOLGA5Q8TBA6 731 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 PRRX2Q99811 253 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 SLC2A4RGQ9NR83 387 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 FBXL21Q9UKT6 434 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 SLC27A5Q9Y2P5 690 aa21.85■■□□□ 1.09
CLK3-225ENST00000569063 ZNF318Q5VUA4 2279 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 TNNC2P02585 160 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 CFHP08603 1231 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 CEBPBP17676 345 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 CCR2P41597 374 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 ALDH1A3P47895 512 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 EPHB3P54753 998 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 NUCB2P80303 420 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 CYP24A1Q07973 514 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 PSMD6Q15008 389 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 LMBRD2Q68DH5 695 aaPredicted RBP21.84■■□□□ 1.09
CLK3-225ENST00000569063 POTEHQ6S545 545 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 HS6ST3Q8IZP7 471 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 TMEM86AQ8N2M4 240 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 PDCL2Q8N4E4 241 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 FSIP1Q8NA03 581 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 ST13P5Q8NFI4 369 aaPredicted RBP21.84■■□□□ 1.09
CLK3-225ENST00000569063 C2orf15Q8WU43 125 aaKnown RBP21.84■■□□□ 1.09
CLK3-225ENST00000569063 TMEM174Q8WUU8 243 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 TCEAL4Q96EI5 215 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 MCRS1Q96EZ8 462 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 DNAJC25Q9H1X3 360 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 MFSD1Q9H3U5 465 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 GDPD2Q9HCC8 539 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 TCHHQ07283 1943 aa21.84■■□□□ 1.09
CLK3-225ENST00000569063 HUS1O60921 280 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 PRPF40AO75400 957 aaKnown RBP21.83■■□□□ 1.09
CLK3-225ENST00000569063 RPN1P04843 607 aaKnown RBP21.83■■□□□ 1.09
CLK3-225ENST00000569063 NPR3P17342 541 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 TUFMP49411 452 aaKnown RBP21.83■■□□□ 1.09
CLK3-225ENST00000569063 CLCN5P51795 746 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 NUBP1P53384 320 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 BFSP1Q12934 665 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 MYO1EQ12965 1108 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 ASTLQ6HA08 431 aaPredicted RBP21.83■■□□□ 1.09
CLK3-225ENST00000569063 KRBA2Q6ZNG9 492 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 LRRTM3Q86VH5 581 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 SIX5Q8N196 739 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 TTC9BQ8N6N2 239 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 TOP6BLQ8N6T0 577 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 SPATA18Q8TC71 538 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 FNBP1Q96RU3 617 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 LRRC3Q9BY71 257 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 GOLPH3LQ9H4A5 285 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 ASAH2Q9NR71 780 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 L1RE1Q9UN81 338 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 R3HCC1Q9Y3T6 440 aaKnown RBP21.83■■□□□ 1.09
CLK3-225ENST00000569063 ASB3Q9Y575 518 aa21.83■■□□□ 1.09
CLK3-225ENST00000569063 KMT2EQ8IZD2 1858 aa21.83■■□□□ 1.08
CLK3-225ENST00000569063 WDFY4Q6ZS81 3184 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 MOSPD3O75425 235 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 ECI2O75521 394 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 ZNF202O95125 648 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 DCP1BQ8IZD4 617 aaKnown RBP21.82■■□□□ 1.08
CLK3-225ENST00000569063 GPR152Q8TDT2 470 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 CGRRF1Q99675 332 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 ACBD6Q9BR61 282 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 KCTD10Q9H3F6 313 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 DMAC2Q9NW81 257 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 SNX9Q9Y5X1 595 aa21.82■■□□□ 1.08
CLK3-225ENST00000569063 EXOC3O60645 756 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 PRR29P0C7W0 189 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 DLATP10515 647 aaKnown RBP21.81■■□□□ 1.08
CLK3-225ENST00000569063 MYL4P12829 197 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 TNNI1P19237 187 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 GPC5P78333 572 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 DPYDQ12882 1025 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 DPH6Q7L8W6 267 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 TRAPPC11Q7Z392 1133 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 LIMS2Q7Z4I7 341 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 TMC8Q8IU68 726 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 SLC9A9Q8IVB4 645 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 TMEM105Q8N8V8 129 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 SPPL2BQ8TCT7 592 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 PSMG2Q969U7 264 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 CCDC127Q96BQ5 260 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 HPDLQ96IR7 371 aa21.81■■□□□ 1.08
CLK3-225ENST00000569063 KXD1Q9BQD3 176 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms