RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 USP25Q9UHP3 1055 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 LRP5O75197 1615 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 KIF1BO60333 1816 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 BCL9LQ86UU0 1499 aa4.3□□□□□ -1.72
HMGB1P6-201ENST00000569046 ATRNO75882 1429 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 ADGRL3Q9HAR2 1447 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 NCOA3Q9Y6Q9 1424 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 SPHKAPQ2M3C7 1700 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 ANKRD30AQ9BXX3 1397 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 EP400Q96L91 3159 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 COL22A1Q8NFW1 1626 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 A0A1B0GTW7 788 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 CCDC194A0A1B0GVG4 234 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 CDHR4A6H8M9 788 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 LRRC14BA6NHZ5 514 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 UNC119BA6NIH7 251 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 GRM6O15303 877 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 S100BP04271 92 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 OCA2Q04671 838 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 MCL1Q07820 350 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 SLFN5Q08AF3 891 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 TTF1Q15361 905 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 CATIPQ7Z7H3 387 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 MAPKAPK5Q8IW41 473 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 ULK2Q8IYT8 1036 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 SYNE4Q8N205 404 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 AMER2Q8N7J2 671 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 MARS2Q96GW9 593 aaKnown RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 VRK1Q99986 396 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 TYW1Q9NV66 732 aaKnown RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 IP6K2Q9UHH9 426 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 ATP11BQ9Y2G3 1177 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 FPGT-TNNI3KV9GXZ4 949 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 SRCAPQ6ZRS2 3230 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 C1orf167Q5SNV9 1468 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 COL4A3Q01955 1670 aa4.29□□□□□ -1.72
HMGB1P6-201ENST00000569046 PEX14O75381 377 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 ABLIM3O94929 683 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 ZFPL1O95159 310 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 SPDEFO95238 335 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 POU2F2P09086 479 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 CKBP12277 381 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 FGFR4P22455 802 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 BMPR1AP36894 532 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 HSD11B2P80365 405 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 CREMQ03060 361 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 RESTQ13127 1097 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 SNAPC2Q13487 334 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 TP53BP2Q13625 1128 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 KHDC1Q4VXA5 237 aaKnown RBP4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 LY6G5CQ5SRR4 150 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 KCNV1Q6PIU1 500 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 PCSK4Q6UW60 755 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 ARHGEF19Q8IW93 802 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 EXOC8Q8IYI6 725 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 MIER2Q8N344 545 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 TMEM132CQ8N3T6 1108 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 PRR18Q8N4B5 295 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 FITM2Q8N6M3 262 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 TBC1D15Q8TC07 691 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 HSPBAP1Q96EW2 488 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 GTPBP4Q9BZE4 634 aaKnown RBP4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 TCF7L1Q9HCS4 588 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 AASDHPPTQ9NRN7 309 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 HSFX1Q9UBD0 423 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 GABBR1Q9UBS5 961 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 SLC45A2Q9UMX9 530 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 RALGAPBQ86X10 1494 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 VPS8Q8N3P4 1428 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 LAMC1P11047 1609 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 CLTCL1P53675 1640 aa4.28□□□□□ -1.72
HMGB1P6-201ENST00000569046 RGPD1P0DJD0 1748 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 GRID2IPA4D2P6 1211 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 NT5C1B-RDH14C9J2C7 533 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 F2RL2O00254 374 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 AGFG2O95081 481 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 IL33O95760 270 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 CD1AP06126 327 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 SPATA31D3P0C874 917 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 PF4V1P10720 104 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 FCER1AP12319 257 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 ALAS1P13196 640 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 MALP21145 153 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 YY1P25490 414 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 DDX6P26196 483 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 ZEB1P37275 1124 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 HMGA2P52926 109 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 DPTQ07507 201 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 SCAPQ12770 1279 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 RAB39AQ14964 217 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 UTP14CQ5TAP6 766 aaKnown RBP4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 PPP4R3AQ6IN85 833 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 SPATA31D4Q6ZUB0 917 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 USP45Q70EL2 814 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 TTC7BQ86TV6 843 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 FMNL3Q8IVF7 1028 aa4.27□□□□□ -1.73
HMGB1P6-201ENST00000569046 RAVER1Q8IY67 606 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms