RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
GTF3C1-208ENST00000567843 MYO15AQ9UKN7 3530 aa13.2□□□□□ -0.3
GTF3C1-208ENST00000567843 SCN1AP35498 2009 aa13.2□□□□□ -0.3
GTF3C1-208ENST00000567843 CACNA1IQ9P0X4 2223 aa13.2□□□□□ -0.3
GTF3C1-208ENST00000567843 USP34Q70CQ2 3546 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 NCANO14594 1321 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 CUTAO60888 179 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 PPP6R2O75170 966 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 F13A1P00488 732 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 CYP11A1P05108 521 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 KRT19P08727 400 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 ZSCAN22P10073 491 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 GDI1P31150 447 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 NBL1P41271 181 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 ASIC1P78348 528 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 PFKPQ01813 784 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 BFSP1Q12934 665 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 VITQ6UXI7 678 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 THEM5Q8N1Q8 247 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 C1orf127Q8N9H9 656 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 SMARCD2Q92925 531 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 CHAMP1Q96JM3 812 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 TRMT61BQ9BVS5 477 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 LRRC3Q9BY71 257 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 OXCT2Q9BYC2 517 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 TRIM9Q9C026 710 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 LTB4R2Q9NPC1 389 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 ABI2Q9NYB9 513 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 MAFFQ9ULX9 164 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 NDRG2Q9UN36 371 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 DMDP11532 3685 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 GVINP1Q7Z2Y8 2422 aa13.19□□□□□ -0.3
GTF3C1-208ENST00000567843 GPR179Q6PRD1 2367 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 PRR23AA6NEV1 266 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 POLR2DO15514 142 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 HCRTO43612 131 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 EXTL3O43909 919 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 ATF6P18850 670 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 GARTP22102 1010 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 ACAT1P24752 427 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 GABRR2P28476 465 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 EPHA5P54756 1037 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 CYP4F8P98187 520 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 PRKCQQ04759 706 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 PLD1Q13393 1074 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 SV2CQ496J9 727 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 GAREM2Q75VX8 874 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 CBWD2Q8IUF1 395 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 NKD2Q969F2 451 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 MTMR12Q9C0I1 747 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 ATXN3LQ9H3M9 355 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 TMLHEQ9NVH6 421 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 KBTBD4Q9NVX7 518 aa13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 SPATA6Q9NWH7 488 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-208ENST00000567843 PTPRJQ12913 1337 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 HEPACAM2A8MVW5 462 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 CLIC2O15247 247 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 MICAL2O94851 1124 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 YEATS4O95619 227 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 LDHAP00338 332 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 TARSP26639 723 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 HOXD13P35453 343 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 AFMP43652 599 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 ME1P48163 572 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 GPR15P49685 360 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 ALCAMQ13740 583 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 GPR158Q5T848 1215 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 OSTM1Q86WC4 334 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 C1orf210Q8IVY1 113 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 GPD1LQ8N335 351 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 PDCL2Q8N4E4 241 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 IQUBQ8NA54 791 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 LEMD2Q8NC56 503 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 OR5B17Q8NGF7 314 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 PSMG2Q969U7 264 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 BCO2Q9BYV7 579 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 SMG9Q9H0W8 520 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 DSEQ9UL01 958 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 L1RE1Q9UN81 338 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 SPTBN4Q9H254 2564 aa13.17□□□□□ -0.3
GTF3C1-208ENST00000567843 ANK1P16157 1881 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms