RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 A0A1W2PQD8 194 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 MED19A0JLT2 244 aaPredicted RBP12.06□□□□□ -0.48
CDH3-206ENST00000567674 SEC24AO95486 1093 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 SP100P23497 879 aaPredicted RBP12.06□□□□□ -0.48
CDH3-206ENST00000567674 CASP5P51878 434 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 MAPRE1Q15691 268 aaKnown RBP12.06□□□□□ -0.48
CDH3-206ENST00000567674 KNOP1Q1ED39 458 aaKnown RBP12.06□□□□□ -0.48
CDH3-206ENST00000567674 LIMS2Q7Z4I7 341 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 FUBP3Q96I24 572 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDH3-206ENST00000567674 SPATA32Q96LK8 384 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 IER2Q9BTL4 223 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 SEMA4AQ9H3S1 761 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 ZFP14Q9HCL3 533 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 INTS13Q9NVM9 706 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 HPSEQ9Y251 543 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 DMDP11532 3685 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 DOCK8Q8NF50 2099 aa12.06□□□□□ -0.48
CDH3-206ENST00000567674 MTMR11A4FU01 709 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 GABRDO14764 452 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 SPTLC1O15269 473 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 NCAM2O15394 837 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 HUS1O60921 280 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 PRPF6O94906 941 aaKnown RBP12.05□□□□□ -0.48
CDH3-206ENST00000567674 TNNC2P02585 160 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 NPR3P17342 541 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 DDX6P26196 483 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDH3-206ENST00000567674 PCSK1P29120 753 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 ATICP31939 592 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 MYL7Q01449 175 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 TSPY1Q01534 308 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 DNM1Q05193 864 aaKnown RBP12.05□□□□□ -0.48
CDH3-206ENST00000567674 SPAG1Q07617 926 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 TWF1Q12792 350 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 VEPH1Q14D04 833 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 NFIL3Q16649 462 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 DGLUCYQ7Z3D6 616 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 CSGALNACT2Q8N6G5 542 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 C1orf127Q8N9H9 656 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 XXYLT1Q8NBI6 393 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 CXorf38Q8TB03 319 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 ITFG1Q8TB96 612 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 SMARCD2Q92925 531 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 CCDC47Q96A33 483 aaKnown RBP12.05□□□□□ -0.48
CDH3-206ENST00000567674 DDX23Q9BUQ8 820 aaKnown RBP12.05□□□□□ -0.48
CDH3-206ENST00000567674 AGPAT3Q9NRZ7 376 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 HSPBP1Q9NZL4 362 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 MRPS17Q9Y2R5 130 aaKnown RBP12.05□□□□□ -0.48
CDH3-206ENST00000567674 YIPF1Q9Y548 306 aa12.05□□□□□ -0.48
CDH3-206ENST00000567674 CACNA1BQ00975 2339 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 TISP43B9A030 160 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 MAN2B1O00754 1011 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 PDXKO00764 312 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 MAPK13O15264 365 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 TGFB1I1O43294 461 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 TMEM191BP0C7N4 346 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 PFKLP17858 780 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 ARPP19P56211 112 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 CLDN10P78369 228 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 NUCB2P80303 420 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 TFAMQ00059 246 aaKnown RBP12.04□□□□□ -0.48
CDH3-206ENST00000567674 DUSP4Q13115 394 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 PSMD6Q15008 389 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 SNRNP35Q16560 246 aaKnown RBP12.04□□□□□ -0.48
CDH3-206ENST00000567674 CFAP221Q4G0U5 840 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 PARM1Q6UWI2 310 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 SIX5Q8N196 739 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 KIAA1958Q8N8K9 716 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 SCFD1Q8WVM8 642 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 FGF14Q92915 247 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 IRF7Q92985 503 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 ASB16Q96NS5 453 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 CORO1BQ9BR76 489 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 CBWD1Q9BRT8 395 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 LRRC3Q9BY71 257 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 VRTNQ9H8Y1 702 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 ARHGEF3Q9NR81 526 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 EHD2Q9NZN4 543 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 CEP72Q9P209 647 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 UXTQ9UBK9 157 aaPredicted RBP12.04□□□□□ -0.48
CDH3-206ENST00000567674 AGAP1Q9UPQ3 857 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 PCDHB5Q9Y5E4 795 aa12.04□□□□□ -0.48
CDH3-206ENST00000567674 IKBKBO14920 756 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CDH3-206ENST00000567674 TACC1O75410 805 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 ITGB3P05106 788 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 PSMC3P17980 439 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 CDC25CP30307 473 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
CDH3-206ENST00000567674 RPL10AP62906 217 aaKnown RBP12.03□□□□□ -0.48
CDH3-206ENST00000567674 NTHL1P78549 312 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 KCNB1Q14721 858 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 SLC44A4Q53GD3 710 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 ARHGAP15Q53QZ3 475 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 DNAJB7Q7Z6W7 309 aaPredicted RBP12.03□□□□□ -0.48
CDH3-206ENST00000567674 MFSD6LQ8IWD5 586 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 CCDC105Q8IYK2 499 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms