RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 ALG6Q9Y672 507 aa12.48□□□□□ -0.41
BBS4-213ENST00000567279 A0A1W2PQ45 241 aaPredicted RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 A0A1W2PQY0 241 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 DDX3YO15523 660 aaKnown RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 CD4P01730 458 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 ITGA4P13612 1032 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 ATF7P17544 494 aaPredicted RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 IBSPP21815 317 aaPredicted RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 NDST1P52848 882 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 RNASE9P60153 205 aaKnown RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 INCA1Q0VD86 236 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 TRIM71Q2Q1W2 868 aaKnown RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 XKR4Q5GH76 650 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 TTC39CQ8N584 583 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 SPATA4Q8NEY3 305 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 SH3TC2Q8TF17 1288 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 ZNF560Q96MR9 790 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 TSPAN18Q96SJ8 248 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
BBS4-213ENST00000567279 SELENOOQ9BVL4 669 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 ANKZF1Q9H8Y5 726 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
BBS4-213ENST00000567279 MEIS3P2A8K0S8 358 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 SPOPO43791 374 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 CALB1P05937 261 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 COMTP21964 271 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 SOX4Q06945 474 aaPredicted RBP12.46□□□□□ -0.41
BBS4-213ENST00000567279 PTP4A2Q12974 167 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 LPIN1Q14693 890 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 DPH6Q7L8W6 267 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 CPNE8Q86YQ8 564 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 MSANTD4Q8NCY6 345 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 LPPQ93052 612 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 VCPIP1Q96JH7 1222 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 ZFP42Q96MM3 310 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 MRPL45Q9BRJ2 306 aaKnown RBP12.46□□□□□ -0.41
BBS4-213ENST00000567279 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.46□□□□□ -0.41
BBS4-213ENST00000567279 STARD7Q9NQZ5 370 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 ARGLU1Q9NWB6 273 aaPredicted RBP12.46□□□□□ -0.41
BBS4-213ENST00000567279 SCINQ9Y6U3 715 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 CENPFP49454 3210 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 HTTP42858 3142 aa12.46□□□□□ -0.41
BBS4-213ENST00000567279 MIF4GDA9UHW6 222 aaKnown RBP12.46□□□□□ -0.42
BBS4-213ENST00000567279 KBTBD13C9JR72 458 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 PTGESO14684 152 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 VDRP11473 427 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 H2AFXP16104 143 aaPredicted RBP12.46□□□□□ -0.42
BBS4-213ENST00000567279 CYP3A5P20815 502 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 MMP8P22894 467 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 MLH1P40692 756 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 ITIH3Q06033 890 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 SGO2Q562F6 1265 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 ZNF618Q5T7W0 954 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 UBL4BQ8N7F7 174 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 HEXIM2Q96MH2 286 aaKnown RBP12.46□□□□□ -0.42
BBS4-213ENST00000567279 RPS6KC1Q96S38 1066 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 PNKPQ96T60 521 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 NT5C1AQ9BXI3 368 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 PARD6BQ9BYG5 372 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 TRIM7Q9C029 511 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 TRPV6Q9H1D0 765 aa12.46□□□□□ -0.42
BBS4-213ENST00000567279 FAM124BQ9H5Z6 455 aaPredicted RBP12.46□□□□□ -0.42
BBS4-213ENST00000567279 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.42
BBS4-213ENST00000567279 A0A0U1RQG5 324 aaPredicted RBP12.45□□□□□ -0.42
BBS4-213ENST00000567279 M0QYV0 167 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 PGRMC1O00264 195 aaKnown RBP12.45□□□□□ -0.42
BBS4-213ENST00000567279 PIRO00625 290 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 MGEA5O60502 916 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 MICAL2O94851 1124 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 GJB6O95452 261 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 CDH5P33151 784 aaPredicted RBP12.45□□□□□ -0.42
BBS4-213ENST00000567279 MARCKSL1P49006 195 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 TAF6P49848 677 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 SV2CQ496J9 727 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 FAM26DQ5JW98 314 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 MMGT1Q8N4V1 131 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 RNF169Q8NCN4 708 aa12.45□□□□□ -0.42
BBS4-213ENST00000567279 PPP1R10Q96QC0 940 aaKnown RBP12.45□□□□□ -0.42
BBS4-213ENST00000567279 MRPL47Q9HD33 250 aaKnown RBP12.45□□□□□ -0.42
BBS4-213ENST00000567279 MYCP01106 439 aaPredicted RBP12.44□□□□□ -0.42
BBS4-213ENST00000567279 PNPLA4P41247 253 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 ZNF211Q13398 564 aaPredicted RBP12.44□□□□□ -0.42
BBS4-213ENST00000567279 CYP4A22Q5TCH4 519 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 DCAF12L1Q5VU92 463 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 PLEKHA7Q6IQ23 1121 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 CCDC70Q6NSX1 233 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 DNAJC24Q6P3W2 148 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 ERICH1Q86X53 443 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 WDTC1Q8N5D0 677 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 ACTRT1Q8TDG2 376 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 KRT35Q92764 455 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 GAD1Q99259 594 aa12.44□□□□□ -0.42
BBS4-213ENST00000567279 WNT8AQ9H1J5 351 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms