RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 C19orf73Q9NVV2 129 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 RGL1Q9NZL6 768 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 SLAMF8Q9P0V8 285 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 FTSJ1Q9UET6 329 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 HERC5Q9UII4 1024 aaKnown RBP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 MAGEL2Q9UJ55 1249 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 RPS6KA6Q9UK32 745 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 DENND2AQ9ULE3 1009 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 HS3ST4Q9Y661 456 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ERCC6L2Q5T890 1561 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CCDC196A0A1B0GTZ2 297 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 F5H0A9 414 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 NRP2O60462 931 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 SEMA7AO75326 666 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 USP2O75604 605 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 URI1O94763 535 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 ENDOD1O94919 500 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 ADRB1P08588 477 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 IDEP14735 1019 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CHMP24386 653 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CST5P28325 142 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 TNNT3P45378 269 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC6A9P48067 706 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 ACTR2P61160 394 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 HERVK_113P62684 666 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 DLG4P78352 724 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 TLE1Q04724 770 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CALD1Q05682 793 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 GALNT2Q10471 571 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 WASHC5Q12768 1159 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 LRMPQ12912 555 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CDC16Q13042 620 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 RAB39AQ14964 217 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 VWA3BQ502W6 1294 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 EMC4Q5J8M3 183 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 GJC2Q5T442 439 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 NUGGCQ68CJ6 796 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 C22orf34Q6ZV56 151 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 R3HCC1LQ7Z5L2 792 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 THAP5Q7Z6K1 395 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CPLX4Q7Z7G2 160 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 GGNQ86UU5 652 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CABP7Q86V35 215 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 IQCA1Q86XH1 822 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 TRIM48Q8IWZ4 208 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 TRMT2AQ8IZ69 625 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 TSPYL6Q8N831 410 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 ARRDC4Q8NCT1 418 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 GPR156Q8NFN8 814 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 OR1N1Q8NGS0 311 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 SCAMP5Q8TAC9 235 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CPT1CQ8TCG5 803 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CALML6Q8TD86 181 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 MGARPQ8TDB4 240 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 KBTBD7Q8WVZ9 684 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 IPCEF1Q8WWN9 437 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 THAP4Q8WY91 577 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 RNF125Q96EQ8 232 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CCDC34Q96HJ3 373 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CDHR1Q96JP9 859 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 CNDP2Q96KP4 475 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 SPATA17Q96L03 361 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 MRGPRX4Q96LA9 322 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 TRAPPC9Q96Q05 1148 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 FDXACB1Q9BRP7 624 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 EIF2AQ9BY44 585 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 AP5M1Q9H0R1 490 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 MRPL46Q9H2W6 279 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 EPS8L2Q9H6S3 715 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 EPB41L4AQ9HCS5 686 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC39A2Q9NP94 309 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 EIF2B3Q9NR50 452 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 TMEM160Q9NX00 188 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 BTBD7Q9P203 1132 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 IMPACTQ9P2X3 320 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 ZHX1Q9UKY1 873 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 PALD1Q9ULE6 856 aa3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 RUVBL1Q9Y265 456 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 MTO1Q9Y2Z2 717 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 RRP7AQ9Y3A4 280 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-211ENST00000566550 MYBBP1AQ9BQG0 1328 aaKnown RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 hCG_1807616A0A1W2PRN6 198 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CLCA1A8K7I4 914 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PYCARD-AS1I3L0S3 204 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 GJB3O75712 270 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 A1BGP04217 495 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CD1AP06126 327 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 IL1R1P14778 569 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 MUTP22033 750 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PTGS1P23219 599 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ABCD3P28288 659 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 GABRB3P28472 473 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PRDX5P30044 214 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 CLK1P49759 484 aaKnown RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 ARFIP2P53365 341 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 PNLIPRP1P54315 467 aa3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 SESN2P58004 480 aaPredicted RBP3.72□□□□□ -1.81
HERPUD1-211ENST00000566550 AP2B1P63010 937 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms