RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 TMEM59LQ9UK28 342 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 BARX2Q9UMQ3 279 aaPredicted RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 COG5Q9UP83 839 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 AGAP1Q9UPQ3 857 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 NOC2LQ9Y3T9 749 aaKnown RBP9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 GRIN2DO15399 1336 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 FRMPD3Q5JV73 1810 aa9.44□□□□□ -0.9
LSM3P5-201ENST00000566307 SMIM28A0A1B0GU29 152 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 CCDC151A5D8V7 595 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 TMCO5BA8MYB1 307 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 PDE2AO00408 941 aaPredicted RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 INPPL1O15357 1258 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 DDX3YO15523 660 aaKnown RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 THAP12O43422 761 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 RPS6KA5O75582 802 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 CHRNA1P02708 482 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 KRT19P08727 400 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 VDRP11473 427 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 SKIP12755 728 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 HSPA6P17066 643 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 MAN1A1P33908 653 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 ACLYP53396 1101 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 RAD23BP54727 409 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 TAP1Q03518 808 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 ITGA7Q13683 1181 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 DSC3Q14574 896 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 BRD3Q15059 726 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 CNGA2Q16280 664 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 PPP2R5EQ16537 467 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 PTGISQ16647 500 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 FBXO47Q5MNV8 452 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 TEX35Q5T0J7 233 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 DPH6Q7L8W6 267 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 ARRDC4Q8NCT1 418 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF564Q8TBZ8 553 aaPredicted RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 SPATA18Q8TC71 538 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 HNRNPLLQ8WVV9 542 aaKnown RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 CD101Q93033 1021 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 CYFIP2Q96F07 1278 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 ZMAT2Q96NC0 199 aaKnown RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 NUP85Q9BW27 656 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 DNAI2Q9GZS0 605 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 MIS12Q9H081 205 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 SDCBP2Q9H190 292 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 NXF3Q9H4D5 531 aaKnown RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 HMX1Q9NP08 348 aaPredicted RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 SLC38A7Q9NVC3 462 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 WDR35Q9P2L0 1181 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 CNOT8Q9UFF9 292 aaKnown RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 PUF60Q9UHX1 559 aaKnown RBP9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 ST3GAL5Q9UNP4 418 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 PHF24Q9UPV7 400 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 GINS2Q9Y248 185 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 IPPQ9Y573 584 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 CEP83Q9Y592 693 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 ALG6Q9Y672 507 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 TRIP11Q15643 1979 aa9.43□□□□□ -0.9
LSM3P5-201ENST00000566307 A0A0U1RQG5 324 aaPredicted RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 TCRBV5S1A1TA0A578 114 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 CCDC66A2RUB6 948 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 CCDC188H7C350 402 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 SNPHO15079 494 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 TLR3O15455 904 aaKnown RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 ATP8B1O43520 1251 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 NCK2O43639 380 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 SRGAP2O75044 1071 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 INHAP05111 366 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 SETSIPP0DME0 302 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 ZSCAN20P17040 1043 aaPredicted RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 GRK4P32298 578 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 CTNNA1P35221 906 aaKnown RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 GABRB2P47870 512 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 TNNC1P63316 161 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 NAA30Q147X3 362 aaPredicted RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 CCDC181Q5TID7 509 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 NAA35Q5VZE5 725 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 SCARA3Q6AZY7 606 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 CCDC70Q6NSX1 233 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 UBL4BQ8N7F7 174 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 SLC4A11Q8NBS3 891 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 CAGE1Q8TC20 777 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 TSC1Q92574 1164 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 TMEM176AQ96HP8 235 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 GLT1D1Q96MS3 346 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 PPP1R10Q96QC0 940 aaKnown RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 NAP1L3Q99457 506 aaPredicted RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 ZSWIM1Q9BR11 485 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 NT5C1AQ9BXI3 368 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 ELOVL4Q9GZR5 314 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 ANKZF1Q9H8Y5 726 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 UBN1Q9NPG3 1134 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 FAM105AQ9NUU6 356 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms