RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CHEK2O96017 543 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 KRT1P04264 644 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 DHRS4L1P0CG22 281 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 PIM1P11309 404 aaPredicted RBP5.96□□□□□ -1.46
CNOT1-209ENST00000566240 IL1R2P27930 398 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 ITGA8P53708 1063 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 SPARCL1Q14515 664 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 MMS22LQ6ZRQ5 1243 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 DOK3Q7L591 496 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 ANKRD18AQ8IVF6 992 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 YAF2Q8IY57 180 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 GPR135Q8IZ08 494 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 FITM2Q8N6M3 262 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 LINC01356Q8N9X3 169 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 TP53I13Q8NBR0 393 aaPredicted RBP5.96□□□□□ -1.46
CNOT1-209ENST00000566240 CCDC150Q8NCX0 1101 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 SLC17A8Q8NDX2 589 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 TBC1D15Q8TC07 691 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 TFAP2CQ92754 450 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 FAM84AQ96KN4 292 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 DPYSL5Q9BPU6 564 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 LSM14BQ9BX40 385 aaKnown RBP5.96□□□□□ -1.46
CNOT1-209ENST00000566240 TMEM120AQ9BXJ8 343 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 MAGEB5Q9BZ81 275 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 MS4A7Q9GZW8 240 aaPredicted RBP5.96□□□□□ -1.46
CNOT1-209ENST00000566240 XPR1Q9UBH6 696 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 HDAC9Q9UKV0 1011 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 HDAC5Q9UQL6 1122 aa5.96□□□□□ -1.46
CNOT1-209ENST00000566240 B4GALT3O60512 393 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 A1BGP04217 495 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 BTF3P20290 206 aaKnown RBP5.95□□□□□ -1.46
CNOT1-209ENST00000566240 SLC6A2P23975 617 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 SERPINF1P36955 418 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 MAPK9P45984 424 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 PTTG1IPP53801 180 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 FOXO1Q12778 655 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 PRKG1Q13976 671 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 PTK2BQ14289 1009 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 RAB30Q15771 203 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 FKBP15Q5T1M5 1219 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 FAM160B1Q5W0V3 765 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 LVRNQ6Q4G3 990 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 GPRIN1Q7Z2K8 1008 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 FAM83AQ86UY5 434 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 GLIS1Q8NBF1 620 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 FAM46DQ8NEK8 389 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 NEIL1Q96FI4 390 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-209ENST00000566240 KLHL32Q96NJ5 620 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 SPATA5L1Q9BVQ7 753 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 SORBS1Q9BX66 1292 aaKnown RBP5.95□□□□□ -1.46
CNOT1-209ENST00000566240 IMPG2Q9BZV3 1241 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 MSL2Q9HCI7 577 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 NECTIN3Q9NQS3 549 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 PGAP2Q9UHJ9 254 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 MID2Q9UJV3 735 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 OAZ3Q9UMX2 235 aa5.95□□□□□ -1.46
CNOT1-209ENST00000566240 AQP12BA6NM10 295 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 PRR5-ARHGAP8B1AHC4 643 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 E9PLN8 166 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 SYT5O00445 386 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 ACKR2O00590 384 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 CDC14BO60729 498 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 KIF20AO95235 890 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 CNOT4O95628 575 aaKnown RBP5.94□□□□□ -1.46
CNOT1-209ENST00000566240 C1QTNF9P0C862 333 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 VEGFAP15692 232 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-209ENST00000566240 CR2P20023 1033 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 FDXRP22570 491 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 GABRB3P28472 473 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 TCF15Q12870 199 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 SLC29A2Q14542 456 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 POSTNQ15063 836 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 CSRP2Q16527 193 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 VMACQ2NL98 169 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 EFCAB12Q6NXP0 572 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 ZDHHC24Q6UX98 284 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 KRT28Q7Z3Y7 464 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 TEX19Q8NA77 164 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 RNF169Q8NCN4 708 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 DNERQ8NFT8 737 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 IPO4Q8TEX9 1081 aaKnown RBP5.94□□□□□ -1.46
CNOT1-209ENST00000566240 RAPGEF4Q8WZA2 1011 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 SNX27Q96L92 541 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 VKORC1Q9BQB6 163 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 CPPED1Q9BRF8 314 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-209ENST00000566240 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.94□□□□□ -1.462e-6■□□□□ 11.3
CNOT1-209ENST00000566240 NELFAQ9H3P2 528 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 SPON1Q9HCB6 807 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 CD320Q9NPF0 282 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 ITM2CQ9NQX7 267 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 USP40Q9NVE5 1235 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 RGL1Q9NZL6 768 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 IGSF9Q9P2J2 1179 aa5.94□□□□□ -1.46
CNOT1-209ENST00000566240 A0A087WZ62 844 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 RAB27BO00194 218 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 FARP2O94887 1054 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-209ENST00000566240 INMTO95050 263 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 XRCC6P12956 609 aaKnown RBP eCLIP5.93□□□□□ -1.46
CNOT1-209ENST00000566240 IDEP14735 1019 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 COPAP53621 1224 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms