RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 CLTAP09496 248 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 TMEM191BP0C7N4 346 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 MCF2P10911 925 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 SCNN1AP37088 669 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 CDR2Q01850 454 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 TRPC3Q13507 836 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 SWI5Q1ZZU3 235 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 SRGAP1Q7Z6B7 1085 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 ZNF410Q86VK4 478 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 CREG2Q8IUH2 290 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 SPNS2Q8IVW8 549 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 RNF10Q8N5U6 811 aaKnown RBP6.65□□□□□ -1.34
CHD9-217ENST00000565832 ARRDC4Q8NCT1 418 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 VTI1AQ96AJ9 217 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 ERO1AQ96HE7 468 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 ACAP3Q96P50 834 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 TRIM7Q9C029 511 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 CISHQ9NSE2 258 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 TRMT13Q9NUP7 481 aaKnown RBP6.65□□□□□ -1.34
CHD9-217ENST00000565832 CACNG4Q9UBN1 327 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 SRRDQ9UH36 339 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 PIN4Q9Y237 131 aaKnown RBP6.65□□□□□ -1.34
CHD9-217ENST00000565832 SCN10AQ9Y5Y9 1956 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 ERVH48-1M5A8F1 160 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 BUB1BO60566 1050 aaPredicted RBP6.65□□□□□ -1.35
CHD9-217ENST00000565832 ZC3H11AO75152 810 aaKnown RBP eCLIP6.65□□□□□ -1.35
CHD9-217ENST00000565832 CCDC172P0C7W6 258 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 POLR2BP30876 1174 aaKnown RBP6.65□□□□□ -1.35
CHD9-217ENST00000565832 HOXC8P31273 242 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 ASPAP45381 313 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 SEC13P55735 322 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.35
CHD9-217ENST00000565832 SGSM1Q2NKQ1 1148 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 TEX35Q5T0J7 233 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 C10orf76Q5T2E6 689 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 DAB2IPQ5VWQ8 1189 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 CCSAPQ6IQ19 270 aaPredicted RBP6.65□□□□□ -1.35
CHD9-217ENST00000565832 SND1Q7KZF4 910 aaKnown RBP eCLIP6.65□□□□□ -1.35
CHD9-217ENST00000565832 LRRC57Q8N9N7 239 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 ZNF296Q8WUU4 475 aaPredicted RBP6.65□□□□□ -1.35
CHD9-217ENST00000565832 TFAP2BQ92481 460 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 OSBPL9Q96SU4 736 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 MTG1Q9BT17 334 aaPredicted RBP6.65□□□□□ -1.35
CHD9-217ENST00000565832 SDCBP2Q9H190 292 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 ISCUQ9H1K1 167 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 PLEKHA4Q9H4M7 779 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 HMGXB4Q9UGU5 601 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 GTF2IRD1Q9UHL9 959 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 SNX12Q9UMY4 172 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 AGAP1Q9UPQ3 857 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 NOC2LQ9Y3T9 749 aaKnown RBP6.65□□□□□ -1.35
CHD9-217ENST00000565832 MAP4K5Q9Y4K4 846 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 PCDHGC5Q9Y5F6 944 aa6.65□□□□□ -1.35
CHD9-217ENST00000565832 ANKRD62A6NC57 917 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 PRMT3O60678 531 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 GJB6O95452 261 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 TNNC2P02585 160 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RHOXF2BP0C7M4 288 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 YY1P25490 414 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 GNA15P30679 374 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RPIAP49247 311 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 PDE6CP51160 858 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 ENPEPQ07075 957 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 ZNF699Q32M78 642 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 UBXN11Q5T124 520 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 MEI1Q5TIA1 1274 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 NAA35Q5VZE5 725 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RSRC2Q7L4I2 434 aaKnown RBP6.64□□□□□ -1.35
CHD9-217ENST00000565832 DAAM2Q86T65 1068 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RBBP8NLQ8NC74 664 aaPredicted RBP6.64□□□□□ -1.35
CHD9-217ENST00000565832 RAET1EQ8TD07 263 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 ZNF606Q8WXB4 792 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 CTNNBL1Q8WYA6 563 aaPredicted RBP6.64□□□□□ -1.35
CHD9-217ENST00000565832 UBXN4Q92575 508 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RABGGTAQ92696 567 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 ANKRD36BP1Q96IX9 119 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 ALS2CR12Q96Q35 445 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 TWNKQ96RR1 684 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 LPIN3Q9BQK8 851 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RHOXF2Q9BQY4 288 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 ADPGKQ9BRR6 497 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 CELF4Q9BZC1 486 aaKnown RBP6.64□□□□□ -1.35
CHD9-217ENST00000565832 SMYD3Q9H7B4 428 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 AGO3Q9H9G7 860 aaKnown RBP6.64□□□□□ -1.35
CHD9-217ENST00000565832 GOLGA2P5Q9HBQ8 144 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 LUC7LQ9NQ29 371 aaKnown RBP6.64□□□□□ -1.35
CHD9-217ENST00000565832 DPP3Q9NY33 737 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 TUBGCP4Q9UGJ1 667 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 PCDHB2Q9Y5E7 798 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 MROH7Q68CQ1 1323 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 TMEM110-MUSTN1A8MSY1 372 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 EFCAB8A8MWE9 144 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 THAP12O43422 761 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 HCRTO43612 131 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RTN2O75298 545 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 RECQL4O94761 1208 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 TMEM253P0C7T8 217 aa6.64□□□□□ -1.35
CHD9-217ENST00000565832 UNGP13051 313 aaPredicted RBP6.64□□□□□ -1.35
CHD9-217ENST00000565832 BRD2P25440 801 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms