RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 COL4A6Q14031 1691 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 ARHGEF37A1IGU5 675 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 FOXN3O00409 490 aaPredicted RBP13.8□□□□□ -0.2
SPG7-209ENST00000564047 TACC1O75410 805 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 KIF4AO95239 1232 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 CCDC172P0C7W6 258 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 FERP16591 822 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 IGFBP6P24592 240 aaPredicted RBP13.8□□□□□ -0.2
SPG7-209ENST00000564047 SLC11A1P49279 550 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 BCAR1P56945 870 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 TIGD5Q53EQ6 642 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 FAM71AQ8IYT1 594 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 RABGGTAQ92696 567 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 SENP8Q96LD8 212 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 RAD9AQ99638 391 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 SDCBP2Q9H190 292 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 PRDM12Q9H4Q4 367 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 SMYD3Q9H7B4 428 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 CISHQ9NSE2 258 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 ZNHIT6Q9NWK9 470 aaKnown RBP13.8□□□□□ -0.2
SPG7-209ENST00000564047 HCSTQ9UBK5 93 aa13.8□□□□□ -0.2
SPG7-209ENST00000564047 M0QZQ0 153 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 CYB561D2O14569 222 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 TRAPPC3O43617 180 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 HUS1O60921 280 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 TADA2AO75478 443 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 LAG3P18627 525 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 FECHP22830 423 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 ALDH7A1P49419 539 aaKnown RBP13.79□□□□□ -0.2
SPG7-209ENST00000564047 INCA1Q0VD86 236 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 CCDC85BQ15834 202 aaPredicted RBP13.79□□□□□ -0.2
SPG7-209ENST00000564047 ASIC2Q16515 512 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 MEA1Q16626 185 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 LRRC8AQ8IWT6 810 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 APPL2Q8NEU8 664 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
SPG7-209ENST00000564047 SUSD3Q96L08 255 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 MARCH5Q9NX47 278 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
SPG7-209ENST00000564047 PCDHB4Q9Y5E5 795 aa13.79□□□□□ -0.2
SPG7-209ENST00000564047 TRIP11Q15643 1979 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 TLL1O43897 1013 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 CILPO75339 1184 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 GFPT2O94808 682 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 CYP11A1P05108 521 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 ITGB1P05556 798 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 PNMA6AP0CW24 399 aaPredicted RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 ODC1P11926 461 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 KRT5P13647 590 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 CD58P19256 250 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 IGFBP4P22692 258 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 WARSP23381 471 aaKnown RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 USP8P40818 1118 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 PRKCIP41743 596 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 BRCC3P46736 316 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 RAP1GAPP47736 663 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 ZNF132P52740 706 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 CDH8P55286 799 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 BPIFB4P59827 614 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 CDK17Q00537 523 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 E4F1Q66K89 784 aaPredicted RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 TMEM270Q6UE05 265 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 IRF2BP2Q7Z5L9 587 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 UNC93AQ86WB7 457 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 TMEM86AQ8N2M4 240 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 PDCL2Q8N4E4 241 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 HASPINQ8TF76 798 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 ZNF830Q96NB3 372 aaPredicted RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 ZNF558Q96NG5 402 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 ADAM28Q9UKQ2 775 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 DSEQ9UL01 958 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 BARX2Q9UMQ3 279 aaPredicted RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 L1RE1Q9UN81 338 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
SPG7-209ENST00000564047 MUC6Q6W4X9 2439 aa13.78□□□□□ -0.2
SPG7-209ENST00000564047 TDRD15B5MCY1 1934 aaKnown RBP13.77□□□□□ -0.21
SPG7-209ENST00000564047 F8W810 466 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 SERPING1P05155 500 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 TYMPP19971 482 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
SPG7-209ENST00000564047 SPOUT1Q5T280 376 aaKnown RBP13.77□□□□□ -0.21
SPG7-209ENST00000564047 HGSNATQ68CP4 663 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 WDR59Q6PJI9 974 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 KCNT2Q6UVM3 1135 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 ADGRF2Q8IZF7 708 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 RBBP8NLQ8NC74 664 aaPredicted RBP13.77□□□□□ -0.21
SPG7-209ENST00000564047 WHAMMQ8TF30 809 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms