RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 NOP9Q86U38 636 aaKnown RBP20.65■□□□□ 0.9
SPSB3-204ENST00000563741 ADAMTS1Q9UHI8 967 aa20.65■□□□□ 0.9
SPSB3-204ENST00000563741 STXBP5LQ9Y2K9 1186 aa20.65■□□□□ 0.9
SPSB3-204ENST00000563741 A0A087X0T9 212 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 FAM228BP0C875 321 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 IGFBP6P24592 240 aaPredicted RBP20.64■□□□□ 0.9
SPSB3-204ENST00000563741 PDE6CP51160 858 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 LILRA4P59901 499 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 YWHAEP62258 255 aaKnown RBP20.64■□□□□ 0.9
SPSB3-204ENST00000563741 CYP27A1Q02318 531 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 SLC18A3Q16572 532 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 SMYD5Q6GMV2 418 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 MMS19Q96T76 1030 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 PAAF1Q9BRP4 392 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 GDAP2Q9NXN4 497 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 INSL6Q9Y581 213 aa20.64■□□□□ 0.9
SPSB3-204ENST00000563741 KPNA7A9QM74 516 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 DDX3XO00571 662 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPSB3-204ENST00000563741 B4GALT3O60512 393 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 RPL9P32969 192 aaKnown RBP20.64■□□□□ 0.89
SPSB3-204ENST00000563741 INCA1Q0VD86 236 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 UPP1Q16831 310 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 SV2CQ496J9 727 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 NPAS4Q8IUM7 802 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 GLYCTKQ8IVS8 523 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 C3orf58Q8NDZ4 430 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 URGCPQ8TCY9 931 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPSB3-204ENST00000563741 TBC1D13Q9NVG8 400 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 TRMT1Q9NXH9 659 aaKnown RBP20.64■□□□□ 0.89
SPSB3-204ENST00000563741 HMGXB4Q9UGU5 601 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 LRFN2Q9ULH4 789 aa20.64■□□□□ 0.89
SPSB3-204ENST00000563741 CILPO75339 1184 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 UPP2O95045 317 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 IPO7O95373 1038 aaKnown RBP20.63■□□□□ 0.89
SPSB3-204ENST00000563741 CALCAP01258 141 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 HTRA4P83105 476 aaPredicted RBP20.63■□□□□ 0.89
SPSB3-204ENST00000563741 TAP1Q03518 808 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 DSC1Q08554 894 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
SPSB3-204ENST00000563741 VPS36Q86VN1 386 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 LNX1Q8TBB1 728 aaPredicted RBP20.63■□□□□ 0.89
SPSB3-204ENST00000563741 MYLIPQ8WY64 445 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 DDX1Q92499 740 aaKnown RBP20.63■□□□□ 0.89
SPSB3-204ENST00000563741 RABGGTAQ92696 567 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 PPP1R13BQ96KQ4 1090 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 AGPAT1Q99943 283 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 FAM124BQ9H5Z6 455 aaPredicted RBP20.63■□□□□ 0.89
SPSB3-204ENST00000563741 NENFQ9UMX5 172 aa20.63■□□□□ 0.89
SPSB3-204ENST00000563741 GATMP50440 423 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 BPIFB4P59827 614 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 SPA17Q15506 151 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 SOWAHAQ2M3V2 549 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 ZNF394Q53GI3 561 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 PALB2Q86YC2 1186 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 ZNF280BQ86YH2 543 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 ABI1Q8IZP0 508 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 SLC30A5Q8TAD4 765 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 WHAMMQ8TF30 809 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 CASD1Q96PB1 797 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 KANSL3Q9P2N6 904 aa20.62■□□□□ 0.89
SPSB3-204ENST00000563741 A0A0U1RQJ8 604 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 LCHNA4D1U4 455 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 ZSCAN12O43309 604 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 HOXA2O43364 376 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 CHRNB2P17787 502 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 KRT83P78385 493 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 CDR2Q01850 454 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 TAF3Q5VWG9 929 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 LIMS2Q7Z4I7 341 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 ATRIPQ8WXE1 791 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 DDX27Q96GQ7 796 aaKnown RBP20.61■□□□□ 0.89
SPSB3-204ENST00000563741 UROC1Q96N76 676 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 TWNKQ96RR1 684 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 MRPL45Q9BRJ2 306 aaKnown RBP20.61■□□□□ 0.89
SPSB3-204ENST00000563741 PRDM12Q9H4Q4 367 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 BARX2Q9UMQ3 279 aaPredicted RBP20.61■□□□□ 0.89
SPSB3-204ENST00000563741 TDRD15B5MCY1 1934 aaKnown RBP20.61■□□□□ 0.89
SPSB3-204ENST00000563741 ZNF500O60304 480 aaPredicted RBP20.61■□□□□ 0.89
SPSB3-204ENST00000563741 DDHD2O94830 711 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 ARHGEF15O94989 841 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 GNA15P30679 374 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 AARSP49588 968 aaKnown RBP eCLIP20.61■□□□□ 0.89
SPSB3-204ENST00000563741 FMO1Q01740 532 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 REXO1L1PQ8IX06 675 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 YME1L1Q96TA2 773 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
SPSB3-204ENST00000563741 NAGPAQ9UK23 515 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 L1RE1Q9UN81 338 aa20.61■□□□□ 0.89
SPSB3-204ENST00000563741 CHD9Q3L8U1 2897 aa20.6■□□□□ 0.89
SPSB3-204ENST00000563741 MMEP08473 750 aa20.6■□□□□ 0.89
SPSB3-204ENST00000563741 RAD23BP54727 409 aa20.6■□□□□ 0.89
SPSB3-204ENST00000563741 COLGALT2Q8IYK4 626 aa20.6■□□□□ 0.89
SPSB3-204ENST00000563741 TTC39CQ8N584 583 aa20.6■□□□□ 0.89
SPSB3-204ENST00000563741 SP7Q8TDD2 431 aaPredicted RBP20.6■□□□□ 0.89
SPSB3-204ENST00000563741 KBTBD7Q8WVZ9 684 aa20.6■□□□□ 0.89
SPSB3-204ENST00000563741 ELOVL4Q9GZR5 314 aa20.6■□□□□ 0.89
SPSB3-204ENST00000563741 CCP110O43303 1012 aa20.59■□□□□ 0.89
SPSB3-204ENST00000563741 TACC1O75410 805 aa20.59■□□□□ 0.89
SPSB3-204ENST00000563741 B3GAT3O94766 335 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms