RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 DPH6Q7L8W6 267 aa21.8■■□□□ 1.08
CMTM3-206ENST00000563672 OTOP3Q7RTS5 596 aa21.8■■□□□ 1.08
CMTM3-206ENST00000563672 GRASPQ7Z6J2 395 aaPredicted RBP21.8■■□□□ 1.08
CMTM3-206ENST00000563672 ZDHHC14Q8IZN3 488 aa21.8■■□□□ 1.08
CMTM3-206ENST00000563672 TMEM86AQ8N2M4 240 aa21.8■■□□□ 1.08
CMTM3-206ENST00000563672 SPATA18Q8TC71 538 aa21.8■■□□□ 1.08
CMTM3-206ENST00000563672 INSL5Q9Y5Q6 135 aa21.8■■□□□ 1.08
CMTM3-206ENST00000563672 IKBKBO14920 756 aa21.79■■□□□ 1.08
CMTM3-206ENST00000563672 N4BP1O75113 896 aaKnown RBP21.79■■□□□ 1.08
CMTM3-206ENST00000563672 STAU1O95793 577 aaKnown RBP21.79■■□□□ 1.08
CMTM3-206ENST00000563672 PSMC2P35998 433 aaKnown RBP21.79■■□□□ 1.08
CMTM3-206ENST00000563672 ENPEPQ07075 957 aa21.79■■□□□ 1.08
CMTM3-206ENST00000563672 MORC3Q14149 939 aa21.79■■□□□ 1.08
CMTM3-206ENST00000563672 TDRD10Q5VZ19 366 aaKnown RBP21.79■■□□□ 1.08
CMTM3-206ENST00000563672 PLCD3Q8N3E9 789 aa21.79■■□□□ 1.08
CMTM3-206ENST00000563672 TDRD5Q8NAT2 981 aaKnown RBP21.79■■□□□ 1.08
CMTM3-206ENST00000563672 PGLYRP2Q96PD5 576 aa21.79■■□□□ 1.08
CMTM3-206ENST00000563672 CRISPLD1Q9H336 500 aa21.79■■□□□ 1.08
CMTM3-206ENST00000563672 C2orf16Q68DN1 1984 aa21.79■■□□□ 1.08
CMTM3-206ENST00000563672 MTMR11A4FU01 709 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 GABRDO14764 452 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 LRG1P02750 347 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 CD44P16070 742 aaKnown RBP21.78■■□□□ 1.08
CMTM3-206ENST00000563672 VAMP7P51809 220 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 PMS1P54277 932 aaKnown RBP21.78■■□□□ 1.08
CMTM3-206ENST00000563672 MYL6P60660 151 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 NTHL1P78549 312 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 DUSP4Q13115 394 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 ANKRD40Q6AI12 368 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 INTS8Q75QN2 995 aaKnown RBP21.78■■□□□ 1.08
CMTM3-206ENST00000563672 LRRTM3Q86VH5 581 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 ZC3H3Q8IXZ2 948 aaKnown RBP21.78■■□□□ 1.08
CMTM3-206ENST00000563672 FAM186BQ8IYM0 893 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 ACSF2Q96CM8 615 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-206ENST00000563672 MKNK1Q9BUB5 465 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 XYLT2Q9H1B5 865 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 EPHX3Q9H6B9 360 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 DNMT3BQ9UBC3 853 aaKnown RBP21.78■■□□□ 1.08
CMTM3-206ENST00000563672 HSFX1Q9UBD0 423 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 POLIQ9UNA4 740 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 TSC2P49815 1807 aa21.78■■□□□ 1.08
CMTM3-206ENST00000563672 CETN3O15182 167 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 DCXO43602 365 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 VNN1O95497 513 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 ALADP13716 330 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 ATICP31939 592 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 PPP1R2P41236 205 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 SMARCB1Q12824 385 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 TRPC3Q13507 836 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 ZACNQ401N2 412 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 SLC39A12Q504Y0 691 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 OSTM1Q86WC4 334 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 ADGRF2Q8IZF7 708 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 ATAD1Q8NBU5 361 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 DHTKD1Q96HY7 919 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-206ENST00000563672 ACBD6Q9BR61 282 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 VRTNQ9H8Y1 702 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 HCFC1R1Q9NWW0 138 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.77■■□□□ 1.081e-6■■■■□ 20.6
CMTM3-206ENST00000563672 MUTYHQ9UIF7 546 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 DENND4AQ7Z401 1863 aa21.77■■□□□ 1.08
CMTM3-206ENST00000563672 PPP1R3GB7ZBB8 358 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 PHACTR2O75167 634 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 FAM163BP0C2L3 166 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 FSHRP23945 695 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 CCNE1P24864 410 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 LHX1P48742 406 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 FKBP3Q00688 224 aaKnown RBP21.76■■□□□ 1.07
CMTM3-206ENST00000563672 LRRC63Q05C16 580 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 BIRC3Q13489 604 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 STIM1Q13586 685 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 CAMK4Q16566 473 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 SV2AQ7L0J3 742 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 DCP1BQ8IZD4 617 aaKnown RBP21.76■■□□□ 1.07
CMTM3-206ENST00000563672 KBTBD7Q8WVZ9 684 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 EEF2KMTQ96G04 330 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 MYADMQ96S97 322 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 TSG101Q99816 390 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 AVENQ9NQS1 362 aaPredicted RBP21.76■■□□□ 1.07
CMTM3-206ENST00000563672 LMBRD1Q9NUN5 540 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 DDX43Q9NXZ2 648 aaKnown RBP21.76■■□□□ 1.07
CMTM3-206ENST00000563672 CEP72Q9P209 647 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 KIAA1468Q9P260 1216 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 YIPF1Q9Y548 306 aa21.76■■□□□ 1.07
CMTM3-206ENST00000563672 BIN1O00499 593 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 PSMA7O14818 248 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 KRT13P13646 458 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 PTPN2P17706 415 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 MYL7Q01449 175 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 TWF1Q12792 350 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 NCOA4Q13772 614 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 WDR72Q3MJ13 1102 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 TTC9BQ8N6N2 239 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 C2orf15Q8WU43 125 aaKnown RBP21.75■■□□□ 1.07
CMTM3-206ENST00000563672 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
CMTM3-206ENST00000563672 MMS19Q96T76 1030 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 EPS15L1Q9UBC2 864 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 LIMD1Q9UGP4 676 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 SLC27A5Q9Y2P5 690 aa21.75■■□□□ 1.07
CMTM3-206ENST00000563672 TRIM49BA6NDI0 452 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms