RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LMBR1LQ6UX01 489 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ZBTB49Q6ZSB9 765 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 OR7A2PQ8NGA2 310 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 RNASE11Q8TAA1 199 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 ZCWPW1Q9H0M4 648 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ING3Q9NXR8 418 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CDYLQ9Y232 598 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CCNCP24863 283 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 BROXQ5VW32 411 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 TLDC1Q6P9B6 456 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PIGWQ7Z7B1 504 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 MICALL2Q8IY33 904 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 KYQ8NBH2 561 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 BAIAP2Q9UQB8 552 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 KIF20BQ96Q89 1820 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 AATKQ6ZMQ8 1374 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 KATNA1O75449 491 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 MYL2P10916 166 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PHC1P78364 1004 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 TOP3AQ13472 1001 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 SYDE2Q5VT97 1194 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PRMT9Q6P2P2 845 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 G2E3Q7L622 706 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CAMK1DQ8IU85 385 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 RTL3Q8N8U3 475 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 PDCD10Q9BUL8 212 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PCDHB6Q9Y5E3 794 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 SH3PXD2BA1X283 911 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 A6NHS1 94 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 SIN3BO75182 1162 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ING4Q9UNL4 249 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 TOMM70O94826 608 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 APOA4P06727 396 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 GRK2P25098 689 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 MYCT1Q8N699 235 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ADCY4Q8NFM4 1077 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 TRPV5Q9NQA5 729 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 KIAA1210Q9ULL0 1709 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PCP4L1A6NKN8 68 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PDPK1O15530 556 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CCNKO75909 580 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 HALP42357 657 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 KRT24Q2M2I5 525 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ABRAXAS1Q6UWZ7 409 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 RNF19BQ6ZMZ0 732 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 RAPH1Q70E73 1250 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ZNF572Q7Z3I7 529 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 KRT26Q7Z3Y9 468 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CLEC4FQ8N1N0 589 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 FRMD8P1Q9BZ68 369 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 KRT84Q9NSB2 600 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 HPSEQ9Y251 543 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 GIT1Q9Y2X7 761 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CCDC195A0A1B0GUA6 201 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CCDC182A6NF36 153 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 SLC16A3O15427 465 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 FGAP02671 866 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 F8A1P23610 371 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CYP4A11Q02928 519 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CSTF3Q12996 717 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 EIF4A2Q14240 407 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 ZNF829Q3KNS6 432 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 CYP4A22Q5TCH4 519 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 AHI1Q8N157 1196 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 DHX38Q92620 1227 aaKnown RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 EAF2Q96CJ1 260 aaPredicted RBP6.53□□□□□ -1.36
CLK3-212ENST00000563418 BBS2Q9BXC9 721 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 FAIMQ9NVQ4 179 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 ADAM30Q9UKF2 790 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 SFI1A8K8P3 1242 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 CLDN25C9JDP6 229 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 BTBD19C9JJ37 291 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 KRT36O76013 467 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PIK3CAP42336 1068 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 MAGEA4P43358 317 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 MEA1Q16626 185 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 EMC10Q5UCC4 262 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 FAR2Q96K12 515 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 TAS2R1Q9NYW7 299 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 PCDHA12Q9UN75 941 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 GDAQ9Y2T3 454 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 NEU2Q9Y3R4 380 aa6.53□□□□□ -1.36
CLK3-212ENST00000563418 FRMPD1Q5SYB0 1578 aa6.52□□□□□ -1.36
CLK3-212ENST00000563418 FAM196BA6NMK8 535 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 KCNQ3O43525 872 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 LDHBP07195 334 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 POLR2MP0CAP2 368 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 DRG2P55039 364 aaKnown RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 IL1RL1Q01638 556 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 SPOPLQ6IQ16 392 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 ZNF564Q8TBZ8 553 aaPredicted RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 METTL22Q9BUU2 404 aaPredicted RBP6.52□□□□□ -1.37
CLK3-212ENST00000563418 AS3MTQ9HBK9 375 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 TRPC5OSA6NMA1 111 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 RHOBTB3O94955 611 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 GPS1Q13098 491 aa6.52□□□□□ -1.37
CLK3-212ENST00000563418 UBE3CQ15386 1083 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms