RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 MAGEC2Q9UBF1 373 aaPredicted RBP16.34■□□□□ 0.21
EDC3-206ENST00000563009 NXF1Q9UBU9 619 aaKnown RBP16.34■□□□□ 0.21
EDC3-206ENST00000563009 XIRP2A4UGR9 3374 aa16.34■□□□□ 0.21
EDC3-206ENST00000563009 SPTBN5Q9NRC6 3674 aaKnown RBP16.34■□□□□ 0.21
EDC3-206ENST00000563009 KCNJ18B7U540 433 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 TGM5O43548 720 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 LRRN2O75325 713 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 TBX10O75333 385 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 ABLIM3O94929 683 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 GLUD1P00367 558 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 P4HA1P13674 534 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 EPCAMP16422 314 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 WARSP23381 471 aaKnown RBP16.33■□□□□ 0.2
EDC3-206ENST00000563009 MTIF2P46199 727 aaKnown RBP16.33■□□□□ 0.2
EDC3-206ENST00000563009 LHX1P48742 406 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 ZNF165P49910 485 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 ROR1Q01973 937 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 KCNJ12Q14500 433 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 MAN2A1Q16706 1144 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 TCP11X2Q5H9J9 407 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 SPOPLQ6IQ16 392 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 PALB2Q86YC2 1186 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 DHX40Q8IX18 779 aaKnown RBP16.33■□□□□ 0.2
EDC3-206ENST00000563009 THEM5Q8N1Q8 247 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 CASP10Q92851 521 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 ELMO3Q96BJ8 720 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 MMS19Q96T76 1030 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 APOBEC3GQ9HC16 384 aaKnown RBP16.33■□□□□ 0.2
EDC3-206ENST00000563009 CLDND1Q9NY35 253 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 POLIQ9UNA4 740 aa16.33■□□□□ 0.2
EDC3-206ENST00000563009 WDR27A2RRH5 827 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 CAVIN2O95810 425 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 SRGAP2BP0DMP2 458 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 ZNF18P17022 549 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 ASPAP45381 313 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 DLX2Q07687 328 aaPredicted RBP16.32■□□□□ 0.2
EDC3-206ENST00000563009 SKIV2LQ15477 1246 aaKnown RBP16.32■□□□□ 0.2
EDC3-206ENST00000563009 HSP90AA4PQ58FG1 418 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 MIIPQ5JXC2 388 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 TPGS2Q68CL5 300 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 LLGL2Q6P1M3 1020 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 OSTM1Q86WC4 334 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 CREBRFQ8IUR6 639 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 CCDC150Q8NCX0 1101 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 ZNF461Q8TAF7 563 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 LMO3Q8TAP4 145 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 HLA-CQ95604 372 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 ACBD6Q9BR61 282 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 MRPL45Q9BRJ2 306 aaKnown RBP16.32■□□□□ 0.2
EDC3-206ENST00000563009 TUBGCP2Q9BSJ2 902 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 BCO2Q9BYV7 579 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 NIF3L1Q9GZT8 377 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 ZCWPW1Q9H0M4 648 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 SMYD3Q9H7B4 428 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 UBE2ZQ9H832 354 aaPredicted RBP16.32■□□□□ 0.2
EDC3-206ENST00000563009 DDX43Q9NXZ2 648 aaKnown RBP16.32■□□□□ 0.2
EDC3-206ENST00000563009 CLEC1BQ9P126 229 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 FBXW11Q9UKB1 542 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 COG5Q9UP83 839 aa16.32■□□□□ 0.2
EDC3-206ENST00000563009 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
EDC3-206ENST00000563009 BRWD1Q9NSI6 2320 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 PAPLNO95428 1278 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 CETN1Q12798 172 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 GPR17Q13304 367 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 IQCB1Q15051 598 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 WDR44Q5JSH3 913 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 MSLNLQ96KJ4 702 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 TMEM209Q96SK2 561 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 SDCBP2Q9H190 292 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 PLEKHA4Q9H4M7 779 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 DZANK1Q9NVP4 752 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 DPP7Q9UHL4 492 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 MAFFQ9ULX9 164 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
EDC3-206ENST00000563009 NME7Q9Y5B8 376 aa16.31■□□□□ 0.2
EDC3-206ENST00000563009 GTPBP10A4D1E9 387 aaKnown RBP16.3■□□□□ 0.2
EDC3-206ENST00000563009 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 CLSTN1O94985 981 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 OR4Q2P0C623 313 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 CPB1P15086 417 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 ATF2P15336 505 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 HOXB8P17481 243 aaPredicted RBP16.3■□□□□ 0.2
EDC3-206ENST00000563009 LMO2P25791 158 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 PCSK1P29120 753 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 CDH8P55286 799 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 ARPP19P56211 112 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 ANKRD54Q6NXT1 300 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 RTL10Q7L3V2 364 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 KREMEN2Q8NCW0 462 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 PKMYT1Q99640 499 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 NDST4Q9H3R1 872 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 FAM124BQ9H5Z6 455 aaPredicted RBP16.3■□□□□ 0.2
EDC3-206ENST00000563009 CYP3A43Q9HB55 503 aa16.3■□□□□ 0.2
EDC3-206ENST00000563009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.2
EDC3-206ENST00000563009 MAN1C1Q9NR34 630 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms