RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 ODC1P11926 461 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 SCP2P22307 547 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 ADSSP30520 456 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 MAGEA9P43362 315 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 RPS9P46781 194 aaKnown RBP12.6□□□□□ -0.39
USP3-220ENST00000561381 EPHB3P54753 998 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 KCNA1Q09470 495 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 CUL4AQ13619 759 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 MYBPC2Q14324 1141 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 ZNF528Q3MIS6 628 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 CRELD2Q6UXH1 353 aaPredicted RBP12.6□□□□□ -0.39
USP3-220ENST00000561381 GAREM2Q75VX8 874 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 MFSD6LQ8IWD5 586 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 CD302Q8IX05 232 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
USP3-220ENST00000561381 IRF7Q92985 503 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 RMDN1Q96DB5 314 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 LPIN3Q9BQK8 851 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 MKNK1Q9BUB5 465 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 FBXO2Q9UK22 296 aaPredicted RBP12.6□□□□□ -0.39
USP3-220ENST00000561381 MRPS17Q9Y2R5 130 aaKnown RBP12.6□□□□□ -0.39
USP3-220ENST00000561381 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.6□□□□□ -0.39
USP3-220ENST00000561381 PIAS3Q9Y6X2 628 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 TSC2P49815 1807 aa12.6□□□□□ -0.39
USP3-220ENST00000561381 MYMKA6NI61 221 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 MAN2B1O00754 1011 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ZNF263O14978 683 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 NCAM2O15394 837 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ALDH1A3P47895 512 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 WNT7BP56706 349 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 CEBPZQ03701 1054 aaKnown RBP12.59□□□□□ -0.39
USP3-220ENST00000561381 PLD1Q13393 1074 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 SCARA3Q6AZY7 606 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ARMCX5Q6P1M9 558 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ZNF720Q7Z2F6 126 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 DNAJB7Q7Z6W7 309 aaPredicted RBP12.59□□□□□ -0.39
USP3-220ENST00000561381 EFCAB13Q8IY85 973 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ZBTB44Q8NCP5 570 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 DEPDC1BQ8WUY9 529 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ATRIPQ8WXE1 791 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 FAM3CQ92520 227 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 RUBCNQ92622 972 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 NELL1Q92832 810 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 LRRC3BQ96PB8 259 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 PYM1Q9BRP8 204 aaKnown RBP12.59□□□□□ -0.39
USP3-220ENST00000561381 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 ASB7Q9H672 318 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 TRPV5Q9NQA5 729 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 PRMT8Q9NR22 394 aaPredicted RBP12.59□□□□□ -0.39
USP3-220ENST00000561381 DPP3Q9NY33 737 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 TBC1D7Q9P0N9 293 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 AGO2Q9UKV8 859 aaKnown RBP12.59□□□□□ -0.39
USP3-220ENST00000561381 DERAQ9Y315 318 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 PCDHGA2Q9Y5H1 932 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 STYXL1Q9Y6J8 313 aa12.59□□□□□ -0.39
USP3-220ENST00000561381 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
USP3-220ENST00000561381 CYB561D2O14569 222 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 PPP1R37O75864 691 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 CYP11A1P05108 521 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 CCNE1P24864 410 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 SOX9P48436 509 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 RESTQ13127 1097 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 SLC39A12Q504Y0 691 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 ARSIQ5FYB1 569 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 WSCD1Q658N2 575 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 SLFN12LQ6IEE8 588 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 LRRTM3Q86VH5 581 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 ARID3BQ8IVW6 561 aaPredicted RBP12.58□□□□□ -0.4
USP3-220ENST00000561381 TTC8Q8TAM2 541 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 POMGNT1Q8WZA1 660 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 PSMG2Q969U7 264 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 DNAJC19Q96DA6 116 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 BORCS6Q96GS4 357 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 ZFYVE19Q96K21 471 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 FAM84AQ96KN4 292 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 SEPT5Q99719 369 aaPredicted RBP12.58□□□□□ -0.4
USP3-220ENST00000561381 STRA6Q9BX79 667 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 GPR88Q9GZN0 384 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 LMAN1LQ9HAT1 526 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 ZSCAN32Q9NX65 697 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
USP3-220ENST00000561381 A0A087X0B3 334 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 SLC38A8A6NNN8 435 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 LILRB5O75023 590 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 PRAMEF12O95522 483 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 CHRNB1P11230 501 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 TDGF1P13385 188 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 ATF6P18850 670 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 GABRR2P28476 465 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 ABCD1P33897 745 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 TAF6P49848 677 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 CASP5P51878 434 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 CYP4F8P98187 520 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms