RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ODC1P11926 461 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 GABRR2P28476 465 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 SOX9P48436 509 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 FNTBP49356 437 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 GUCY2FP51841 1108 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 CSRP2Q16527 193 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 GPR158Q5T848 1215 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 TXNDC11Q6PKC3 985 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 SENP8Q96LD8 212 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 AK8Q96MA6 479 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 TASP1Q9H6P5 420 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 SEMA4GQ9NTN9 838 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 RBM12Q9NTZ6 932 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 GTSE1Q9NYZ3 720 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.36
CARMIL3-204ENST00000561354 ANO9A1A5B4 782 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 PPEF2O14830 753 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 ADRB1P08588 477 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 ABCD1P33897 745 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 ZNF131P52739 623 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 DMWDQ09019 674 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 CCINQ13939 588 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 C9orf57Q5W0N0 161 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 JADE1Q6IE81 842 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 PRR23CQ6ZRP0 262 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 Q6ZS52 159 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 TTC9BQ8N6N2 239 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 OR10T2Q8NGX3 314 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 FAM200AQ8TCP9 573 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 BPIFB1Q8TDL5 484 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 ZFYVE19Q96K21 471 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 ZMYM5Q9UJ78 669 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 DSEQ9UL01 958 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 DERAQ9Y315 318 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 NUP210Q8TEM1 1887 aaPredicted RBP12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 FRYLO94915 3013 aa12.82□□□□□ -0.36
CARMIL3-204ENST00000561354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 TRAK2O60296 914 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 SOAT2O75908 522 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 CDC25CP30307 473 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 SRSF5Q13243 272 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 VEPH1Q14D04 833 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 PON2Q15165 354 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 PTPAQ15257 358 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 MCTP1Q6DN14 999 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 GPIHBP1Q8IV16 184 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 MYCT1Q8N699 235 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 C2orf15Q8WU43 125 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 ZCWPW1Q9H0M4 648 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 ASB7Q9H672 318 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 PARVGQ9HBI0 331 aa12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 THG1LQ9NWX6 298 aaKnown RBP12.81□□□□□ -0.36
CARMIL3-204ENST00000561354 K7ENM7 598 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 FAM13AO94988 1023 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 PRAMEF12O95522 483 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 NFICP08651 508 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 ATF6P18850 670 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 UBA7P41226 1012 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 MCM2P49736 904 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 GTF2BQ00403 316 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 POU5F1Q01860 360 aaKnown RBP12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 TMEM132DQ14C87 1099 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 ITPRIPL2Q3MIP1 535 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 MGAT5BQ3V5L5 792 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 SLC39A4Q6P5W5 647 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 WDR5BQ86VZ2 330 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 GPBP1Q86WP2 473 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 FAM160A2Q8N612 972 aaPredicted RBP12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 TTC8Q8TAM2 541 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 SPPL2BQ8TCT7 592 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 CALML4Q96GE6 196 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 FIZ1Q96SL8 496 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 SEPT5Q99719 369 aaPredicted RBP12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 LPIN3Q9BQK8 851 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 SLC46A2Q9BY10 475 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 CCSER1Q9C0I3 900 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 BLOC1S4Q9NUP1 217 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 C2orf42Q9NWW7 574 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 C2CD2Q9Y426 696 aa12.8□□□□□ -0.36
CARMIL3-204ENST00000561354 CCDC163A0A0D9SF12 145 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 CYP4F8P98187 520 aa12.79□□□□□ -0.36
CARMIL3-204ENST00000561354 TNK2Q07912 1038 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms