RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PSMA7O14818 248 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 PAPLNO95428 1278 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 LRG1P02750 347 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 TRIM49P0CI25 452 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 TRIM49CP0CI26 452 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 KRT13P13646 458 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 CD44P16070 742 aaKnown RBP21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 VAMP7P51809 220 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 MYL6P60660 151 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 CLDN10P78369 228 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 MORC3Q14149 939 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 ANKRD40Q6AI12 368 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 ADGRF2Q8IZF7 708 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 TDRD5Q8NAT2 981 aaKnown RBP21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 TMC2Q8TDI7 906 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 MMS19Q96T76 1030 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 RHOBTB2Q9BYZ6 727 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 WDR6Q9NNW5 1121 aaKnown RBP21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 INSL5Q9Y5Q6 135 aa21.4■■□□□ 1.02
TSPAN3-210ENST00000561277 CETN3O15182 167 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 MAPK13O15264 365 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 AP3M2P53677 418 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 NTHL1P78549 312 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 GPR17Q13304 367 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 SLC39A12Q504Y0 691 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 INTS8Q75QN2 995 aaKnown RBP21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 TCEAL8Q8IYN2 117 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 TOP6BLQ8N6T0 577 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 MMRN2Q9H8L6 949 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 HCFC1R1Q9NWW0 138 aa21.39■■□□□ 1.01
TSPAN3-210ENST00000561277 MTMR11A4FU01 709 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 VNN2O95498 520 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 DUSP4Q13115 394 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 SOWAHAQ2M3V2 549 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 RNF135Q8IUD6 432 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 TMEM86AQ8N2M4 240 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 ATAD1Q8NBU5 361 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 ZCWPW1Q9H0M4 648 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 LMBRD1Q9NUN5 540 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 DDX43Q9NXZ2 648 aaKnown RBP21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 KIAA1468Q9P260 1216 aa21.38■■□□□ 1.01
TSPAN3-210ENST00000561277 C4BPAP04003 597 aaKnown RBP21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 ACAT1P24752 427 aaKnown RBP21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 TNNC1P63316 161 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 LRRC63Q05C16 580 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 TWF1Q12792 350 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 NCOA4Q13772 614 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 WDR72Q3MJ13 1102 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 C1orf220Q5T0J3 134 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 RTL10Q7L3V2 364 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 GET4Q7L5D6 327 aaPredicted RBP21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 SYAP1Q96A49 352 aaPredicted RBP21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 DHTKD1Q96HY7 919 aaPredicted RBP21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 CRISPLD1Q9H336 500 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 CTNND2Q9UQB3 1225 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 YIPF1Q9Y548 306 aa21.37■■□□□ 1.01
TSPAN3-210ENST00000561277 HCRTO43612 131 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 VNN1O95497 513 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 EPB41P11171 864 aaKnown RBP21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 CCNE1P24864 410 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 GBP2P32456 591 aaPredicted RBP21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 PPP1R2P41236 205 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 FKBP3Q00688 224 aaKnown RBP21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 MYL7Q01449 175 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 TSPY1Q01534 308 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 ZNF699Q32M78 642 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 ZACNQ401N2 412 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 SV2AQ7L0J3 742 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 OTOP3Q7RTS5 596 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 OSTM1Q86WC4 334 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 TTC9BQ8N6N2 239 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 ELMO3Q96BJ8 720 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 ACSF2Q96CM8 615 aaPredicted RBP21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 MKNK1Q9BUB5 465 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 CLSTN2Q9H4D0 955 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 NXF1Q9UBU9 619 aaKnown RBP21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 MUTYHQ9UIF7 546 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 MAFFQ9ULX9 164 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 SLC27A5Q9Y2P5 690 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 PPP1R3GB7ZBB8 358 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 IKBKBO14920 756 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 ATICP31939 592 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 GCLMP48507 274 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 DPH6Q7L8W6 267 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 LRRTM3Q86VH5 581 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 KBTBD7Q8WVZ9 684 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 NELFBQ8WX92 580 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 XYLT2Q9H1B5 865 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 DNMT3BQ9UBC3 853 aaKnown RBP21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 USTQ9Y2C2 406 aa21.36■■□□□ 1.01
TSPAN3-210ENST00000561277 N4BP1O75113 896 aaKnown RBP21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 SOAT2O75908 522 aa21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 FSHRP23945 695 aa21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 PIK3CAP42336 1068 aa21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 PPP3CAQ08209 521 aa21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 PABPC1LQ4VXU2 614 aaKnown RBP21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 DCP1BQ8IZD4 617 aaKnown RBP21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 TRIML1Q8N9V2 468 aa21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 SEPT5Q99719 369 aaPredicted RBP21.35■■□□□ 1.01
TSPAN3-210ENST00000561277 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.35■■□□□ 1.016e-6■■■■■ 48.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms