RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 MTMR12Q9C0I1 747 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 DNAJC25Q9H1X3 360 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 GDE1Q9NZC3 331 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 DSEQ9UL01 958 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 SLC27A5Q9Y2P5 690 aa18.56■□□□□ 0.56
CDC42BPB-208ENST00000561271 MYO16Q9Y6X6 1858 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 KPNA7A9QM74 516 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 STK25O00506 426 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 MOSPD3O75425 235 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 FCARP24071 287 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 NUBP1P53384 320 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 EPHA5P54756 1037 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 EHHADHQ08426 723 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 PLD1Q13393 1074 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 CUL4BQ13620 913 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 SLC39A12Q504Y0 691 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 CYP4A22Q5TCH4 519 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 METTL23Q86XA0 190 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 CBWD2Q8IUF1 395 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 BORCS6Q96GS4 357 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 PLA2G2FQ9BZM2 168 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZCWPW1Q9H0M4 648 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 HSPBP1Q9NZL4 362 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 RCOR1Q9UKL0 485 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZDHHC9Q9Y397 364 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 FAM186AA6NE01 2351 aa18.55■□□□□ 0.56
CDC42BPB-208ENST00000561271 ATG2BQ96BY7 2078 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 UBE4BO95155 1302 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZNF197O14709 1029 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 TMEM191BP0C7N4 346 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 BFSP1Q12934 665 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 TEAD2Q15562 447 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 FAM78AQ5JUQ0 283 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 TMC8Q8IU68 726 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 NELFCDQ8IXH7 590 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 SHKBP1Q8TBC3 707 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 ATOH1Q92858 354 aaPredicted RBP18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 SEPT5Q99719 369 aaPredicted RBP18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 SERTAD1Q9UHV2 236 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 SIX4Q9UIU6 781 aa18.54■□□□□ 0.56
CDC42BPB-208ENST00000561271 USP34Q70CQ2 3546 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 KIAA0391O15091 583 aaKnown RBP18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 TGFB1I1O43294 461 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 ACTN4O43707 911 aaKnown RBP18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 ECI2O75521 394 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 KRT19P08727 400 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 PNPLA4P41247 253 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 ALDH1A3P47895 512 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 EPHB3P54753 998 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 RIF1Q5UIP0 2472 aaKnown RBP18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 TANGO2Q6ICL3 276 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 CCDC105Q8IYK2 499 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 CEP57L1Q8IYX8 460 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 THEM5Q8N1Q8 247 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 LEMD2Q8NC56 503 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 CXorf38Q8TB03 319 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZNF507Q8TCN5 953 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 CACTINQ8WUQ7 758 aaKnown RBP18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 LEO1Q8WVC0 666 aaPredicted RBP18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 SCFD1Q8WVM8 642 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZSWIM3Q96MP5 696 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 LRRC3Q9BY71 257 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 FOXQ1Q9C009 403 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 AGPAT3Q9NRZ7 376 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 MYO15AQ9UKN7 3530 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 ITGA11Q9UKX5 1188 aa18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZFHX2Q9C0A1 2572 aaPredicted RBP18.53■□□□□ 0.56
CDC42BPB-208ENST00000561271 NCANO14594 1321 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 A0A1W2PRU2 124 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 MICAL2O94851 1124 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 PFKFB1P16118 471 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 ATF6P18850 670 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 CYP2J2P51589 502 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 SNW1Q13573 536 aaKnown RBP18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 GRM2Q14416 872 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 MLF2Q15773 248 aaPredicted RBP18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 LRRTM3Q86VH5 581 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 PDCL2Q8N4E4 241 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 CSGALNACT2Q8N6G5 542 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 LRRC52Q8N7C0 313 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 OR5B17Q8NGF7 314 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 ELSPBP1Q96BH3 223 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 SPATA32Q96LK8 384 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 ASB16Q96NS5 453 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 LPIN3Q9BQK8 851 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 SLITRK6Q9H5Y7 841 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 ZNF334Q9HCZ1 680 aaPredicted RBP18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 SLC39A2Q9NP94 309 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 INTS13Q9NVM9 706 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 ABI2Q9NYB9 513 aaPredicted RBP18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 L1RE1Q9UN81 338 aa18.52■□□□□ 0.56
CDC42BPB-208ENST00000561271 A0A1B0GVL5 298 aa18.51■□□□□ 0.55
CDC42BPB-208ENST00000561271 ZNF233A6NK53 670 aa18.51■□□□□ 0.55
CDC42BPB-208ENST00000561271 CLIC2O15247 247 aa18.51■□□□□ 0.55
CDC42BPB-208ENST00000561271 KRT85P78386 507 aa18.51■□□□□ 0.55
CDC42BPB-208ENST00000561271 SNRNP35Q16560 246 aaKnown RBP18.51■□□□□ 0.55
CDC42BPB-208ENST00000561271 MGAT5BQ3V5L5 792 aa18.51■□□□□ 0.55
CDC42BPB-208ENST00000561271 STXBP5Q5T5C0 1151 aa18.51■□□□□ 0.55
CDC42BPB-208ENST00000561271 PHLDB3Q6NSJ2 640 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms