RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PI4K2AQ9BTU6 479 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 NMUR2Q9GZQ4 415 aa17.38■□□□□ 0.37
TPM1-228ENST00000560975 FAM237BA0A1B0GVD1 139 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 GAS7O60861 476 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 OPHN1O60890 802 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 RNASEH1O60930 286 aaKnown RBP17.37■□□□□ 0.37
TPM1-228ENST00000560975 BGNP21810 368 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 SCNN1BP51168 640 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 GPX6P59796 221 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 SESTD1Q86VW0 696 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 CBWD2Q8IUF1 395 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 NACC1Q96RE7 527 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 PKD2L1Q9P0L9 805 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
TPM1-228ENST00000560975 P4HA2O15460 535 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 PSMC4P43686 418 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 GEMIN4P57678 1058 aaKnown RBP17.37■□□□□ 0.37
TPM1-228ENST00000560975 KDSRQ06136 332 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 GRAPQ13588 217 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 RASA2Q15283 850 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 RIPOR1Q6ZS17 1223 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 ARHGAP18Q8N392 663 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
TPM1-228ENST00000560975 CENPKQ9BS16 269 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 NDE1Q9NXR1 346 aa17.37■□□□□ 0.37
TPM1-228ENST00000560975 GAKO14976 1311 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 IGLV3-22A0A075B6J6 115 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 A6NJR5 290 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 FOSP01100 380 aaPredicted RBP17.36■□□□□ 0.37
TPM1-228ENST00000560975 CIITAP33076 1130 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 GTF2IP78347 998 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 PLCB3Q01970 1234 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 PASD1Q8IV76 773 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 HELQQ8TDG4 1101 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 TAS1R2Q8TE23 839 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 DTNBP1Q96EV8 351 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 OXNAD1Q96HP4 312 aaPredicted RBP17.36■□□□□ 0.37
TPM1-228ENST00000560975 THTPAQ9BU02 230 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 EBF3Q9H4W6 596 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 PREBQ9HCU5 417 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 MTO1Q9Y2Z2 717 aaKnown RBP17.36■□□□□ 0.37
TPM1-228ENST00000560975 ABCA3Q99758 1704 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 hCG_2014768A0A024R1R8 64 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 CYP3A4P08684 503 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 GYS1P13807 737 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 CEP128Q6ZU80 1094 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 CENPUQ71F23 418 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 TRIM74Q86UV6 250 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 TRIM73Q86UV7 250 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 CCDC110Q8TBZ0 833 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 ACSF2Q96CM8 615 aaPredicted RBP17.36■□□□□ 0.37
TPM1-228ENST00000560975 PAFAH2Q99487 392 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 LXNQ9BS40 222 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 C10orf88Q9H8K7 445 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 ZWILCHQ9H900 591 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 ARHGEF4Q9NR80 690 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 SLC24A2Q9UI40 661 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 PPM1HQ9ULR3 514 aa17.36■□□□□ 0.37
TPM1-228ENST00000560975 PROSCO94903 275 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 CFBP00751 764 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 CDK7P50613 346 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 PRELPP51888 382 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 RHOT1Q8IXI2 618 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 ARHGAP24Q8N264 748 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 FAM163AQ96GL9 167 aaPredicted RBP17.35■□□□□ 0.37
TPM1-228ENST00000560975 NT5C1BQ96P26 610 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 FAM111AQ96PZ2 611 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 PANX3Q96QZ0 392 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 C11orf70Q9BRQ4 267 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 FOXP3Q9BZS1 431 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 DDX43Q9NXZ2 648 aaKnown RBP17.35■□□□□ 0.37
TPM1-228ENST00000560975 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 A8MXQ7 604 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 ALOX15BO15296 676 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 LIASO43766 372 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 PSMD10O75832 226 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 SCNN1DP51172 638 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 CDC16Q13042 620 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 RBM15BQ8NDT2 890 aaKnown RBP17.35■□□□□ 0.37
TPM1-228ENST00000560975 MMADHCQ9H3L0 296 aaPredicted RBP17.35■□□□□ 0.37
TPM1-228ENST00000560975 ETNK2Q9NVF9 386 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 RABGEF1Q9UJ41 708 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 CLUHO75153 1309 aa17.35■□□□□ 0.37
TPM1-228ENST00000560975 ZNFX1Q9P2E3 1918 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 CIB2O75838 187 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 DLDP09622 509 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 TCF4P15884 667 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 EAPPQ56P03 285 aaPredicted RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 PADI6Q6TGC4 694 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 TREML1Q86YW5 311 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 SCUBE1Q8IWY4 988 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 SHKBP1Q8TBC3 707 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 ACCSQ96QU6 501 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 STRA6Q9BX79 667 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 RANBP17Q9H2T7 1088 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 UNC45AQ9H3U1 944 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 CHCHD3Q9NX63 227 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 ATXN10Q9UBB4 475 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 PPARGC1AQ9UBK2 798 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms