RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 COILP38432 576 aaPredicted RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 PAPOLAP51003 745 aaKnown RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 CLCN2P51788 898 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 MXRA7P84157 204 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 CNTN2Q02246 1040 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 MTMR1Q13613 665 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 LRRC41Q15345 812 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ENOX2Q16206 610 aaKnown RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 GNPTABQ3T906 1256 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 B3GNT9Q6UX72 402 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 TDRPQ86YL5 185 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 NELFCDQ8IXH7 590 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 RBBP8NLQ8NC74 664 aaPredicted RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ARRDC4Q8NCT1 418 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 PIP4K2CQ8TBX8 421 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 FBXO25Q8TCJ0 367 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 LZICQ8WZA0 190 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 SLC35C1Q96A29 364 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ALKBH8Q96BT7 664 aaKnown RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF577Q9BSK1 485 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 MMADHCQ9H3L0 296 aaPredicted RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 SUDS3Q9H7L9 328 aaPredicted RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 TMEM206Q9H813 350 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ETNK1Q9HBU6 452 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 KCNK9Q9NPC2 374 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 FETUBQ9UGM5 382 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 TCEAL9Q9UHQ7 104 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 LRCH1Q9Y2L9 728 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 SNX24Q9Y343 169 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ARIH1Q9Y4X5 557 aaPredicted RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 NR2E3Q9Y5X4 410 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 NFASCO94856 1347 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 MROH7Q68CQ1 1323 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 PRUNE2Q8WUY3 3088 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 FAM47DPA6NHR8 397 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ASB14A6NK59 587 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 A8MXQ7 604 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 PDLIM1O00151 329 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 PRPF4O43172 522 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SPOPO43791 374 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SORBS3O60504 671 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 EXOC3O60645 756 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 CCDC22O60826 627 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 DKC1O60832 514 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 FAM13AO94988 1023 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 TTC4O95801 387 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SNAI1O95863 264 aaPredicted RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 MYCNP04198 464 aaPredicted RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF865P0CJ78 1059 aaPredicted RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 RARBP10826 455 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ITGA4P13612 1032 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 AKR1A1P14550 325 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 BRAFP15056 766 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ATF2P15336 505 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ITGB5P18084 799 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SLC9A1P19634 815 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SFNP31947 248 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ICAM3P32942 547 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 VHLP40337 213 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 PTGIRP43119 386 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 FMO5P49326 533 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 JAK3P52333 1124 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SLC12A3P55017 1021 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 MRPS9P82933 396 aaKnown RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 MYL7Q01449 175 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 KRT76Q01546 638 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 PTK6Q13882 451 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SEPT7Q16181 437 aaKnown RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 CCDC6Q16204 474 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 MUM1Q2TAK8 710 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SLC45A4Q5BKX6 768 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ZC3H12AQ5D1E8 599 aaKnown RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ZDHHC24Q6UX98 284 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ARMCX2Q7L311 632 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ENOSF1Q7L5Y1 443 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SLC13A5Q86YT5 568 aaPredicted RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 DEFB123Q8N688 67 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 CYP2W1Q8TAV3 490 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 MDM1Q8TC05 714 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 LRRC15Q8TF66 581 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 DHX38Q92620 1227 aaKnown RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 STMN2Q93045 179 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 AGPAT1Q99943 283 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 TRIM51Q9BSJ1 452 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 TIPINQ9BVW5 301 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 TRIM31Q9BZY9 425 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 MIS12Q9H081 205 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ADAM7Q9H2U9 754 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ABHD16BQ9H3Z7 469 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ZHX3Q9H4I2 956 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 AGO4Q9HCK5 861 aaKnown RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 PAPOLBQ9NRJ5 636 aaKnown RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 KCNH7Q9NS40 1196 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 FGFR1OP2Q9NVK5 253 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.05□□□□□ -0.96
CCDC33-209ENST00000560565 GRHL1Q9NZI5 618 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 LNPEPQ9UIQ6 1025 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms