RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ZNF518BQ9C0D4 1074 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 SDCBP2Q9H190 292 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 PDCL3Q9H2J4 239 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 SMYD3Q9H7B4 428 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 GOLGA2P5Q9HBQ8 144 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 ABHD14A-ACY1A0A1B0GW23 586 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM189-UBE2V1I3L0A0 370 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 PPEF2O14830 753 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 LSM8O95777 96 aaKnown RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 CYP1A1P04798 512 aaPredicted RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 MMEP08473 750 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM253P0C7T8 217 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 UNGP13051 313 aaPredicted RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 TNNT1P13805 278 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 RAG1P15918 1043 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 ARHGAP25P42331 645 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 RAP1GAPP47736 663 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 LHX1P48742 406 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 AARSP49588 968 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 CLCNKBP51801 687 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 NDST1P52848 882 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 CENPCQ03188 943 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 DSC1Q08554 894 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 IFI16Q16666 785 aaKnown RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 CLEC16AQ2KHT3 1053 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 SOWAHAQ2M3V2 549 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 CLLU1OSQ5K130 101 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 DNTTIP2Q5QJE6 756 aaKnown RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 TAF3Q5VWG9 929 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 ACAD10Q6JQN1 1059 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 DCLRE1AQ6PJP8 1040 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 DEFB128Q7Z7B8 93 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 NPAS4Q8IUM7 802 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 GPIHBP1Q8IV16 184 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM130Q8N3G9 435 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 SLC4A11Q8NBS3 891 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 UBE2Q2Q8WVN8 375 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 CTNNBL1Q8WYA6 563 aaPredicted RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 TRIM11Q96F44 468 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 VCPIP1Q96JH7 1222 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 TNIP3Q96KP6 325 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 LACRTQ9GZZ8 138 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 LHX5Q9H2C1 402 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 RRAGDQ9NQL2 400 aaPredicted RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 RNF19AQ9NV58 838 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 SEPT11Q9NVA2 429 aaKnown RBP9.17□□□□□ -0.94
TRAF3-209ENST00000560463 GUCA1BQ9UMX6 200 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 INPP5FQ9Y2H2 1132 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 CEP83Q9Y592 693 aa9.17□□□□□ -0.94
TRAF3-209ENST00000560463 COL4A6Q14031 1691 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 CARNS1A5YM72 827 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 TRIM43BA6NCK2 446 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 M0QZQ0 153 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 CYB561D2O14569 222 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 SPTLC1O15269 473 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 TRAPPC3O43617 180 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 BAIAP3O94812 1187 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 FTLP02792 175 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 MYBL1P10243 752 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 ODC1P11926 461 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 IBSPP21815 317 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 WARSP23381 471 aaKnown RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 CDH5P33151 784 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 GNL1P36915 607 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 GALCP54803 685 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 GPC5P78333 572 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 RNASELQ05823 741 aaKnown RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 TCEAL1Q15170 157 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 CNGA2Q16280 664 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 ZNF394Q53GI3 561 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 SGO2Q562F6 1265 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 DSTYKQ6XUX3 929 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 RHOT2Q8IXI1 618 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 COLGALT2Q8IYK4 626 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 CRYBG2Q8N1P7 616 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM35BQ8NCS4 154 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 TRIM58Q8NG06 486 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 KIF18AQ8NI77 898 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 SECISBP2LQ93073 1101 aaKnown RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 TRIM43Q96BQ3 446 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 SENP8Q96LD8 212 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 CASD1Q96PB1 797 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 PCDHB18PQ96TA0 734 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 ELOVL4Q9GZR5 314 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 ACP6Q9NPH0 428 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 PRDM5Q9NQX1 630 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 TBC1D13Q9NVG8 400 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 PRKAG2Q9UGJ0 569 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 PUF60Q9UHX1 559 aaKnown RBP9.16□□□□□ -0.94
TRAF3-209ENST00000560463 DSEQ9UL01 958 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 L1RE1Q9UN81 338 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 STXBP5LQ9Y2K9 1186 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 PLXNA3P51805 1871 aa9.16□□□□□ -0.94
TRAF3-209ENST00000560463 MKI67P46013 3256 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms