RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 AGPAT3Q9NRZ7 376 aa14.08□□□□□ -0.15
TRAF3-208ENST00000560371 SCHIP1Q9P0W5 487 aaPredicted RBP14.08□□□□□ -0.15
TRAF3-208ENST00000560371 HERVK_113P62684 666 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 E2F5Q15329 346 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 USP13Q92995 863 aaPredicted RBP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 FBXO32Q969P5 355 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 SPAG7O75391 227 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 CD302Q8IX05 232 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 IPMKQ8NFU5 416 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 OSBPL8Q9BZF1 889 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 PCDHB12Q9Y5F1 795 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 PDHXO00330 501 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 ATP1A1P05023 1023 aaKnown RBP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 ACO1P21399 889 aaKnown RBP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 FBXO38Q6PIJ6 1188 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 MS4A14Q96JA4 679 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 PXMP2Q9NR77 195 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 FHOD1Q9Y613 1164 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 ZSCAN9O15535 394 aaPredicted RBP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 BRD2P25440 801 aaKnown RBP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 ETFBP38117 255 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 PPP2R2AP63151 447 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 PDCLQ13371 301 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 STAT4Q14765 748 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 TRADDQ15628 312 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 TPX2Q9ULW0 747 aaKnown RBP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 A0A1B0GTH6 734 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 SREBF1P36956 1147 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 NAB2Q15742 525 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAF3-208ENST00000560371 MTMR12Q9C0I1 747 aa14.08□□□□□ -0.16
TRAF3-208ENST00000560371 GOLGA8RI6L899 631 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 TADA3O75528 432 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 DNERQ8NFT8 737 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 FEZF2Q8TBJ5 459 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 CALML6Q8TD86 181 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 CXCL11O14625 94 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 SLC37A4O43826 429 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 GGCXP38435 758 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 FMR1Q06787 632 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 MTF1Q14872 753 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 DEFB128Q7Z7B8 93 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 CYB561D2O14569 222 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 PQBP1O60828 265 aaKnown RBP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 ALDH2P05091 517 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 DCCP43146 1447 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 ARMC6Q6NXE6 501 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 EHD4Q9H223 541 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 METTL5Q9NRN9 209 aaKnown RBP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 PAK5Q9P286 719 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 SNX12Q9UMY4 172 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 STRNO43815 780 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 SFSWAPQ12872 951 aaKnown RBP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 SPATA16Q9BXB7 569 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 C20orf96Q9NUD7 363 aaPredicted RBP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 FBXL5Q9UKA1 691 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 SDK1Q7Z5N4 2213 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 ASS1P00966 412 aaKnown RBP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 FGFR4P22455 802 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 SEZ6Q53EL9 994 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 SELENONQ9NZV5 590 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 RNF103-CHMP3A0A140T963 221 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 NKRFO15226 690 aaKnown RBP eCLIP14.07□□□□□ -0.162e-9■□□□□ 10.5
TRAF3-208ENST00000560371 ZNF286BP0CG31 522 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 C1orf146Q5VVC0 180 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 RTFDC1Q9BY42 306 aaPredicted RBP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 CHCHD3Q9NX63 227 aaKnown RBP14.07□□□□□ -0.16
TRAF3-208ENST00000560371 DSEQ9UL01 958 aa14.07□□□□□ -0.16
TRAF3-208ENST00000560371 M0QYT0 321 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 LMNAP02545 664 aaKnown RBP14.06□□□□□ -0.16
TRAF3-208ENST00000560371 POLBP06746 335 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 USP10Q14694 798 aaKnown RBP14.06□□□□□ -0.16
TRAF3-208ENST00000560371 PKN3Q6P5Z2 889 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 TMC7Q7Z402 723 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 PPP1R36Q96LQ0 422 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 CYP2C8P10632 490 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 PPP3CCP48454 512 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 ARFIP2P53365 341 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 CUL2Q13617 745 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 ZNF507Q8TCN5 953 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 MICAL3Q7RTP6 2002 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 MIB1Q86YT6 1006 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 TRIM48Q8IWZ4 208 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 SLC25A41Q8N5S1 370 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAF3-208ENST00000560371 CINPQ9BW66 212 aaPredicted RBP14.06□□□□□ -0.16
TRAF3-208ENST00000560371 DPP7Q9UHL4 492 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 WNT10BO00744 389 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 ZNF263O14978 683 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 CST8O60676 142 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 MTFR1Q15390 333 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 ZRANB3Q5FWF4 1079 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 PCNX4Q63HM2 1172 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 GMCL1P1Q8NEA9 526 aa14.06□□□□□ -0.16
TRAF3-208ENST00000560371 RPRD1AQ96P16 312 aaPredicted RBP14.06□□□□□ -0.16
TRAF3-208ENST00000560371 REREQ9P2R6 1566 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms