RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 MTMR11A4FU01 709 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 TMEM221A6NGB7 291 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 M0R296 226 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 PRRG1O14668 218 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 KIF20AO95235 890 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 STAU1O95793 577 aaKnown RBP14.22□□□□□ -0.13
SMAD3-213ENST00000560175 LRG1P02750 347 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 RHOP08100 348 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 OR4Q2P0C623 313 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 TMEM191BP0C7N4 346 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 CPB1P15086 417 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 GBP2P32456 591 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-213ENST00000560175 CYP2J2P51589 502 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 DUSP4Q13115 394 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 TDGQ13569 410 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 MTMR3Q13615 1198 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 PABPC1LQ4VXU2 614 aaKnown RBP14.22□□□□□ -0.13
SMAD3-213ENST00000560175 ZCWPW2Q504Y3 356 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 LMBRD2Q68DH5 695 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-213ENST00000560175 METTL23Q86XA0 190 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 PDCL2Q8N4E4 241 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 TOP6BLQ8N6T0 577 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 ITFG1Q8TB96 612 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 C2orf15Q8WU43 125 aaKnown RBP14.22□□□□□ -0.13
SMAD3-213ENST00000560175 FGF13Q92913 245 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 CCDC47Q96A33 483 aaKnown RBP14.22□□□□□ -0.13
SMAD3-213ENST00000560175 PKMYT1Q99640 499 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 ACBD6Q9BR61 282 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 L1RE1Q9UN81 338 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 ZDBF2Q9HCK1 2354 aa14.22□□□□□ -0.13
SMAD3-213ENST00000560175 EXOC3O60645 756 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 TNNC2P02585 160 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 C4BPAP04003 597 aaKnown RBP14.21□□□□□ -0.13
SMAD3-213ENST00000560175 AP3M2P53677 418 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 ENPEPQ07075 957 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 HTR4Q13639 388 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 SLC5A9Q2M3M2 681 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 SOWAHAQ2M3V2 549 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 SLC44A3Q8N4M1 653 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 ATAD1Q8NBU5 361 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 LEMD2Q8NC56 503 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 CCDC34Q96HJ3 373 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 HPDLQ96IR7 371 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 GSDMAQ96QA5 445 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 FNBP1Q96RU3 617 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 DNAJC25Q9H1X3 360 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 VRTNQ9H8Y1 702 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 GDE1Q9NZC3 331 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 DUSP12Q9UNI6 340 aa14.21□□□□□ -0.13
SMAD3-213ENST00000560175 DENND4CQ5VZ89 1909 aa14.21□□□□□ -0.14
SMAD3-213ENST00000560175 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 IKBKBO14920 756 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 HUS1O60921 280 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 MOSPD3O75425 235 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 NR3C1P04150 777 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 DLATP10515 647 aaKnown RBP14.2□□□□□ -0.14
SMAD3-213ENST00000560175 TNNI1P19237 187 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 COL9A1P20849 921 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 CCR2P41597 374 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 LHX1P48742 406 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 TUFMP49411 452 aaKnown RBP14.2□□□□□ -0.14
SMAD3-213ENST00000560175 CASP4P49662 377 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 TWF1Q12792 350 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 MYO1EQ12965 1108 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 PNOCQ13519 176 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 GET4Q7L5D6 327 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-213ENST00000560175 NPAS3Q8IXF0 933 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 SPPL2BQ8TCT7 592 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 TMC2Q8TDI7 906 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
SMAD3-213ENST00000560175 ZNF512Q96ME7 567 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-213ENST00000560175 PGLYRP2Q96PD5 576 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 XYLT2Q9H1B5 865 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 SMOC2Q9H3U7 446 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 POLIQ9UNA4 740 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 YIPF1Q9Y548 306 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 ASB3Q9Y575 518 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 SNX9Q9Y5X1 595 aa14.2□□□□□ -0.14
SMAD3-213ENST00000560175 LRRIQ3A6PVS8 624 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-213ENST00000560175 NRG2O14511 850 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-213ENST00000560175 ZNF197O14709 1029 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 CALUO43852 315 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-213ENST00000560175 TACC1O75410 805 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 KRT19P08727 400 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 ATICP31939 592 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 BFSP1Q12934 665 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 PLD1Q13393 1074 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 C1orf220Q5T0J3 134 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 FAM171BQ6P995 826 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 OSTM1Q86WC4 334 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 TMC8Q8IU68 726 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 DCP1BQ8IZD4 617 aaKnown RBP14.19□□□□□ -0.14
SMAD3-213ENST00000560175 TTC9BQ8N6N2 239 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 KBTBD7Q8WVZ9 684 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 RSAD2Q8WXG1 361 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 FGF14Q92915 247 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 CCDC127Q96BQ5 260 aa14.19□□□□□ -0.14
SMAD3-213ENST00000560175 CORO1BQ9BR76 489 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms