RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 HLA-DRAP01903 254 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 CYP11A1P05108 521 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 GNL1P36915 607 aaPredicted RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 PIK3CAP42336 1068 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 MTHFRP42898 656 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 RAP1GAPP47736 663 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 AP3M2P53677 418 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 TNNC1P63316 161 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 LRRC63Q05C16 580 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 ITIH3Q06033 890 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 PAK1Q13153 545 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 CBX2Q14781 532 aaPredicted RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 NFIL3Q16649 462 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 TPD52L1Q16890 204 aaPredicted RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 ZNF699Q32M78 642 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 TTI2Q6NXR4 508 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 CCDC149Q6ZUS6 474 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 INTS8Q75QN2 995 aaKnown RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 FILIP1Q7Z7B0 1213 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 ADGRF2Q8IZF7 708 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 TTC9BQ8N6N2 239 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 OR6B3Q8NGW1 331 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 GPR152Q8TDT2 470 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 TAS1R2Q8TE23 839 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 GIPC2Q8TF65 315 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 HDAC7Q8WUI4 952 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 SYAP1Q96A49 352 aaPredicted RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 ZNF707Q96C28 371 aaPredicted RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 MRPL45Q9BRJ2 306 aaKnown RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 PHF7Q9BWX1 381 aaPredicted RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 TMLHEQ9NVH6 421 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 HCFC1R1Q9NWW0 138 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 GDAP2Q9NXN4 497 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 ARMCX3Q9UH62 379 aaPredicted RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 AFF4Q9UHB7 1163 aaKnown RBP9.18□□□□□ -0.94
USP3-217ENST00000560070 FBXW11Q9UKB1 542 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 GTF3C4Q9UKN8 822 aa9.18□□□□□ -0.94
USP3-217ENST00000560070 WDR81Q562E7 1941 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 BICDL2A1A5D9 508 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 MYBPHLA2RUH7 354 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 A8MXQ7 604 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 IKBKBO14920 756 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 MAPK13O15264 365 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 VNN2O95498 520 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 LRG1P02750 347 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ATF2P15336 505 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ATICP31939 592 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 GBP2P32456 591 aaPredicted RBP9.17□□□□□ -0.94
USP3-217ENST00000560070 PPP1R2P41236 205 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 NLRP12P59046 1061 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 PSMC1P62191 440 aaKnown RBP9.17□□□□□ -0.94
USP3-217ENST00000560070 CLDN10P78369 228 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 MYL7Q01449 175 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 TWF1Q12792 350 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 LRMPQ12912 555 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ORC1Q13415 861 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 SGSM1Q2NKQ1 1148 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 UVSSAQ2YD98 709 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ZACNQ401N2 412 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 HSP90AA4PQ58FG1 418 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ZNF667Q5HYK9 610 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 SDHAF4Q5VUM1 108 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 DCP1BQ8IZD4 617 aaKnown RBP9.17□□□□□ -0.94
USP3-217ENST00000560070 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 GJD3Q8N144 294 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 TRIML1Q8N9V2 468 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 MLKLQ8NB16 471 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 FAM200AQ8TCP9 573 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 TMEM174Q8WUU8 243 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 SUSD6Q92537 303 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 SEMA4DQ92854 862 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 MED15Q96RN5 788 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 SEPT5Q99719 369 aaPredicted RBP9.17□□□□□ -0.94
USP3-217ENST00000560070 CORO1BQ9BR76 489 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ZCWPW1Q9H0M4 648 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 SDCBP2Q9H190 292 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 XYLT2Q9H1B5 865 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 CRISPLD1Q9H336 500 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 SMYD3Q9H7B4 428 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ZDHHC7Q9NXF8 308 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 ABI2Q9NYB9 513 aaPredicted RBP9.17□□□□□ -0.94
USP3-217ENST00000560070 DNMT3BQ9UBC3 853 aaKnown RBP9.17□□□□□ -0.94
USP3-217ENST00000560070 LIMD1Q9UGP4 676 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 PRRC2BQ5JSZ5 2229 aaKnown RBP9.17□□□□□ -0.94
USP3-217ENST00000560070 LOXHD1Q8IVV2 1947 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 GBF1Q92538 1859 aa9.17□□□□□ -0.94
USP3-217ENST00000560070 CDH23Q9H251 3354 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 MTMR11A4FU01 709 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 C2CD4DB7Z1M9 353 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 SLC16A3O15427 465 aaKnown RBP9.16□□□□□ -0.94
USP3-217ENST00000560070 STX10O60499 249 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 XYLBO75191 536 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 HNRNPA1P09651 372 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP3-217ENST00000560070 ALDH1A3P47895 512 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 LHX1P48742 406 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 GPR15P49685 360 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 TSPY1Q01534 308 aa9.16□□□□□ -0.94
USP3-217ENST00000560070 CYP27A1Q02318 531 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms