RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CBWD6Q4V339 395 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 CBWD3Q5JTY5 395 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 CBWD5Q5RIA9 395 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 TCERG1LQ5VWI1 586 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 SLC27A1Q6PCB7 646 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 ZPBP2Q6X784 338 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 RPAINQ86UA6 219 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 RTN4RL1Q86UN2 441 aaPredicted RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 EFCAB13Q8IY85 973 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 GPD1LQ8N335 351 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 NME8Q8N427 588 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 XXYLT1Q8NBI6 393 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 SMG8Q8ND04 991 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 SLC17A8Q8NDX2 589 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 TTC16Q8NEE8 873 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 DBF4BQ8NFT6 615 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 OR5B17Q8NGF7 314 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 BORCS6Q96GS4 357 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 SPACA7Q96KW9 195 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 NSUN5Q96P11 429 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 TUBGCP2Q9BSJ2 902 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 IFIH1Q9BYX4 1025 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 XPO4Q9C0E2 1151 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 THAP9Q9H5L6 903 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 RBAKQ9NYW8 714 aaPredicted RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 AJAP1Q9UKB5 411 aaPredicted RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
SPG11-220ENST00000559933 PLAGL2Q9UPG8 496 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 KCNMB2Q9Y691 235 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 STYXL1Q9Y6J8 313 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 PTPRSQ13332 1948 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 COL4A6Q14031 1691 aa5.66□□□□□ -1.5
SPG11-220ENST00000559933 A0A1B0GUA9 196 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 FAM170AA1A519 330 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 LACTBL1A8MY62 500 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 PPEF2O14830 753 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 EPHB6O15197 1021 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 OGTO15294 1046 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 EXTL3O43909 919 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 B4GALT3O60512 393 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 RECQL4O94761 1208 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 SERPINC1P01008 464 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 MCF2P10911 925 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 FGFR1P11362 822 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 ACTN1P12814 892 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 PCSK2P16519 638 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 CDK11BP21127 795 aaKnown RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 GARTP22102 1010 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 IGFBP6P24592 240 aaPredicted RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 SOX18P35713 384 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 PSMC2P35998 433 aaKnown RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 MLH1P40692 756 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 PPP1R2P41236 205 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 VAMP7P51809 220 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 ZNF75DP51815 510 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 BFSP1Q12934 665 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 BFSP2Q13515 415 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 DSC3Q14574 896 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 NFIL3Q16649 462 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 TWF2Q6IBS0 349 aaKnown RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 JADE1Q6IE81 842 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 FAM117BQ6P1L5 589 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 NOTUMQ6P988 496 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 GJB7Q6PEY0 223 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.65□□□□□ -1.5
SPG11-220ENST00000559933 FILIP1Q7Z7B0 1213 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 TRIM59Q8IWR1 403 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 C12orf56Q8IXR9 622 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 SPC24Q8NBT2 197 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 CAGE1Q8TC20 777 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 RABGGTAQ92696 567 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 BADQ92934 168 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 KCNN1Q92952 543 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 SLC35C1Q96A29 364 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 C18orf25Q96B23 403 aaPredicted RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 PLD4Q96BZ4 506 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 SNX27Q96L92 541 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 FBXL18Q96ME1 805 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 ZMAT2Q96NC0 199 aaKnown RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 TOX2Q96NM4 488 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 ADAM2Q99965 735 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 CRACR2AQ9BSW2 395 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 TRIM5Q9C035 493 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 MTMR12Q9C0I1 747 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 GOLGA2P5Q9HBQ8 144 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 FAM105AQ9NUU6 356 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 MAGEC2Q9UBF1 373 aaPredicted RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 TUBGCP4Q9UGJ1 667 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 PARP2Q9UGN5 583 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 LIMA1Q9UHB6 759 aaKnown RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 CPSF3Q9UKF6 684 aaKnown RBP5.65□□□□□ -1.5
SPG11-220ENST00000559933 INPP5FQ9Y2H2 1132 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 FRMD4BQ9Y2L6 1034 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 IPPQ9Y573 584 aa5.65□□□□□ -1.5
SPG11-220ENST00000559933 TRIP11Q15643 1979 aa5.65□□□□□ -1.51
SPG11-220ENST00000559933 MROH7Q68CQ1 1323 aa5.65□□□□□ -1.51
SPG11-220ENST00000559933 MICAL3Q7RTP6 2002 aa5.65□□□□□ -1.51
SPG11-220ENST00000559933 PDCD11Q14690 1871 aaKnown RBP5.64□□□□□ -1.51
SPG11-220ENST00000559933 LAMA2P24043 3122 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms