RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 NEK11Q8NG66 645 aa12.4□□□□□ -0.42
TM2D3-208ENST00000559891 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.42
TM2D3-208ENST00000559891 LPIN3Q9BQK8 851 aa12.4□□□□□ -0.42
TM2D3-208ENST00000559891 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
TM2D3-208ENST00000559891 UBE2OQ9C0C9 1292 aaKnown RBP12.4□□□□□ -0.42
TM2D3-208ENST00000559891 SLC38A7Q9NVC3 462 aa12.4□□□□□ -0.42
TM2D3-208ENST00000559891 MARCH5Q9NX47 278 aa12.4□□□□□ -0.42
TM2D3-208ENST00000559891 HMGXB4Q9UGU5 601 aa12.4□□□□□ -0.42
TM2D3-208ENST00000559891 KPNA7A9QM74 516 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 MAP2K7O14733 419 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 GALTP07902 379 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 CETN1Q12798 172 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 CCDC142Q17RM4 750 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 LONRF2Q1L5Z9 754 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 ZNF394Q53GI3 561 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 NT5C1BQ96P26 610 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 MMS19Q96T76 1030 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 IRX2Q9BZI1 471 aaPredicted RBP12.4□□□□□ -0.43
TM2D3-208ENST00000559891 LZTFL1Q9NQ48 299 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 PLCB1Q9NQ66 1216 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 GBF1Q92538 1859 aa12.4□□□□□ -0.43
TM2D3-208ENST00000559891 LRRC53A6NM62 1247 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 FOXN3O00409 490 aaPredicted RBP12.39□□□□□ -0.43
TM2D3-208ENST00000559891 EFCAB14O75071 495 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 RGS19P49795 217 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 HTRA4P83105 476 aaPredicted RBP12.39□□□□□ -0.43
TM2D3-208ENST00000559891 DRAP1Q14919 205 aaPredicted RBP12.39□□□□□ -0.43
TM2D3-208ENST00000559891 SOWAHAQ2M3V2 549 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 TAS1R1Q7RTX1 841 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 LRRC43Q8N309 656 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 MSANTD4Q8NCY6 345 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 FAM193BQ96PV7 902 aaPredicted RBP12.39□□□□□ -0.43
TM2D3-208ENST00000559891 TWNKQ96RR1 684 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 MRPL45Q9BRJ2 306 aaKnown RBP12.39□□□□□ -0.43
TM2D3-208ENST00000559891 GPR62Q9BZJ7 368 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 RAB21Q9UL25 225 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 KIAA1671Q9BY89 1806 aa12.39□□□□□ -0.43
TM2D3-208ENST00000559891 HOXA2O43364 376 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 XPOTO43592 962 aaKnown RBP12.38□□□□□ -0.43
TM2D3-208ENST00000559891 TLL1O43897 1013 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 ACO1P21399 889 aaKnown RBP12.38□□□□□ -0.43
TM2D3-208ENST00000559891 TAF6P49848 677 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 HNRNPH2P55795 449 aaKnown RBP12.38□□□□□ -0.43
TM2D3-208ENST00000559891 ARID5AQ03989 594 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 GPS2Q13227 327 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 CUL2Q13617 745 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 ZNF667Q5HYK9 610 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 SPOUT1Q5T280 376 aaKnown RBP12.38□□□□□ -0.43
TM2D3-208ENST00000559891 TMTC1Q8IUR5 882 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 VN1R3Q9BXE9 311 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 ANKZF1Q9H8Y5 726 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 MTUS1Q9ULD2 1270 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 L1RE1Q9UN81 338 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 CSPG5O95196 566 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 LMO2P25791 158 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 SSTR3P32745 418 aaPredicted RBP12.38□□□□□ -0.43
TM2D3-208ENST00000559891 KRT9P35527 623 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 WSCD1Q658N2 575 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 KBTBD7Q8WVZ9 684 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 SENP8Q96LD8 212 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 IMPG2Q9BZV3 1241 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 NIF3L1Q9GZT8 377 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 PSD3Q9NYI0 1048 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 MYO1AQ9UBC5 1043 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 YBX2Q9Y2T7 364 aaKnown RBP12.38□□□□□ -0.43
TM2D3-208ENST00000559891 VWA8A3KMH1 1905 aa12.38□□□□□ -0.43
TM2D3-208ENST00000559891 EYSQ5T1H1 3165 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 CTAGE9A4FU28 777 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 TULP2O00295 520 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 CYB561D2O14569 222 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 ALDH2P05091 517 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 PLEKP08567 350 aaPredicted RBP12.37□□□□□ -0.43
TM2D3-208ENST00000559891 RPL9P32969 192 aaKnown RBP12.37□□□□□ -0.43
TM2D3-208ENST00000559891 USP8P40818 1118 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 JAM2P57087 298 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 TRIM14Q14142 442 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 DCLRE1AQ6PJP8 1040 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 CACNA2D4Q7Z3S7 1137 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 WHAMMQ8TF30 809 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 MRPL9Q9BYD2 267 aaKnown RBP12.37□□□□□ -0.43
TM2D3-208ENST00000559891 BCO2Q9BYV7 579 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 CEP72Q9P209 647 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 A0A0U1RQJ8 604 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 F8VZ95 297 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 CYP26A1O43174 497 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 GFPT2O94808 682 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 ACAT1P24752 427 aaKnown RBP12.37□□□□□ -0.43
TM2D3-208ENST00000559891 ATICP31939 592 aa12.37□□□□□ -0.43
TM2D3-208ENST00000559891 BEND6Q5SZJ8 279 aaPredicted RBP12.37□□□□□ -0.43
TM2D3-208ENST00000559891 WDR59Q6PJI9 974 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms