RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 HIP1RO75146 1068 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 EGFP01133 1207 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 CXCL8P10145 99 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 ATF6P18850 670 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
AC243562.3-201ENST00000559866 AARSP49588 968 aaKnown RBP eCLIP17■□□□□ 0.31
AC243562.3-201ENST00000559866 GUCY1B3Q02153 619 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 ZNF252P-AS1Q0IIN9 211 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 GPR17Q13304 367 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 GNL2Q13823 731 aaKnown RBP17■□□□□ 0.31
AC243562.3-201ENST00000559866 ZNF174Q15697 407 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 TMEM196Q5HYL7 178 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 EZH1Q92800 747 aaPredicted RBP17■□□□□ 0.31
AC243562.3-201ENST00000559866 PSMG2Q969U7 264 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 RUSC1Q9BVN2 902 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 OBP2AQ9NY56 170 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 ANKFY1Q9P2R3 1169 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 CCL26Q9Y258 94 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 PCDHGA5Q9Y5G8 931 aa17■□□□□ 0.31
AC243562.3-201ENST00000559866 CCDC163A0A0D9SF12 145 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 E9PMD0 336 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 DPYSL4O14531 572 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 SLC16A4O15374 487 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 RNF40O75150 1001 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 MUTP22033 750 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 CCT6AP40227 531 aaKnown RBP16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 PLD1Q13393 1074 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 ITPRIPL2Q3MIP1 535 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 KDF1Q8NAX2 398 aaPredicted RBP16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 OR10T2Q8NGX3 314 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 TCHPQ9BT92 498 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 SLC46A2Q9BY10 475 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 VPS45Q9NRW7 570 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 DDX19AQ9NUU7 478 aaKnown RBP16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 IGF2RP11717 2491 aa16.99■□□□□ 0.31
AC243562.3-201ENST00000559866 LNP1A1A4G5 178 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 AKAP3O75969 853 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 LRPAP1P30533 357 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 TNFSF9P41273 254 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 ALDH1A3P47895 512 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 MCM2P49736 904 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 NEK4P51957 841 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 NBR1Q14596 966 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 KCNK18Q7Z418 384 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 HAUS6Q7Z4H7 955 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 STKLD1Q8NE28 680 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 GATA6Q92908 595 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 FAM83CQ9BQN1 747 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 KMT5AQ9NQR1 393 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 GKN1Q9NS71 199 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 SLC8A2Q9UPR5 921 aa16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 HELZP42694 1942 aaKnown RBP16.98■□□□□ 0.31
AC243562.3-201ENST00000559866 ATRXP46100 2492 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 NBEAQ8NFP9 2946 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 THADAQ6YHU6 1953 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 ZFYVE26Q68DK2 2539 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 ANTXRLA6NF34 631 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 SFI1A8K8P3 1242 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 PP2D1A8MPX8 630 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 ARSAP15289 507 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 CREB5Q02930 508 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 ZBTB6Q15916 424 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 SH3PXD2AQ5TCZ1 1133 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 TMEM150AQ86TG1 271 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 C4orf32Q8N8J7 132 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 ADAM33Q9BZ11 813 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 TASP1Q9H6P5 420 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 INVSQ9Y283 1065 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 STK24Q9Y6E0 443 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 SCN1AP35498 2009 aa16.97■□□□□ 0.31
AC243562.3-201ENST00000559866 TTC26A0AVF1 554 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 OR6C75A6NL08 312 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 SRRM3A6NNA2 597 aaPredicted RBP16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 PATE3B3GLJ2 98 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 WEE1P30291 646 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 NMT1P30419 496 aaKnown RBP16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 DMP1Q13316 513 aaPredicted RBP16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 RUNX3Q13761 415 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 TTC38Q5R3I4 469 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 OVOS1Q6IE37 1185 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 KIF12Q96FN5 646 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 RAB34Q9BZG1 259 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 FOXP1Q9H334 677 aaPredicted RBP16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 ASB3Q9Y575 518 aa16.96■□□□□ 0.31
AC243562.3-201ENST00000559866 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 ACAP1Q15027 740 aa16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 ARHGAP15Q53QZ3 475 aa16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 DSTYKQ6XUX3 929 aa16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 RPLP0P6Q8NHW5 317 aa16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 GIPC2Q8TF65 315 aa16.95■□□□□ 0.3
AC243562.3-201ENST00000559866 USP13Q92995 863 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms