RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GALCP54803 685 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 WDR49Q8IV35 697 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 DHX35Q9H5Z1 703 aaKnown RBP11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 ASB7Q9H672 318 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 MAD1L1Q9Y6D9 718 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 RTN2O75298 545 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PPP1R37O75864 691 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 GYPCP04921 128 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 HMBSP08397 361 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 SLC10A3P09131 477 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PLTPP55058 493 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PTENP60484 403 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 SLC18A3Q16572 532 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 HHATQ5VTY9 493 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PALM2Q8IXS6 379 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PARD3BQ8TEW8 1205 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 OSBPL9Q96SU4 736 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PARVAQ9NVD7 372 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 KIAA0100Q14667 2235 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 IRS2Q9Y4H2 1338 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 LYPLA2O95372 231 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 ATF2P15336 505 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 ACO1P21399 889 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 CTXN3Q4LDR2 81 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 SPON2Q9BUD6 331 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 AP1M1Q9BXS5 423 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 TPX2Q9ULW0 747 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 NID2Q14112 1375 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 LRRIQ3A6PVS8 624 aaPredicted RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 B4GALT5O43286 388 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 APOEP02649 317 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 FAM200BP0CF97 657 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 LMNB2Q03252 620 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 ITIH3Q06033 890 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 GBP5Q96PP8 586 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 DUSP9Q99956 384 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 MAF1Q9H063 256 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 TMEM134Q9H6X4 195 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 YY1AP1Q9H869 796 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 CNOT10Q9H9A5 744 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 NCK2O43639 380 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 FGGP02679 453 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 URODP06132 367 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 BRSK2Q8IWQ3 736 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 RFFLQ8WZ73 363 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PBKQ96KB5 322 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 FAM114A2Q9NRY5 505 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 IP6K2Q9UHH9 426 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 PCDHB12Q9Y5F1 795 aa11.23□□□□□ -0.61
CARMIL3-202ENST00000559694 TAF11Q15544 211 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 EEF1DP3Q658K8 133 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 FOXR1Q6PIV2 292 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 C1orf228Q6PIY5 440 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 PACS2Q86VP3 889 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 TATDN2Q93075 761 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 NOP53Q9NZM5 478 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 CHORDC1Q9UHD1 332 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 FNDC3AQ9Y2H6 1198 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 DAAM1Q9Y4D1 1078 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 PASKQ96RG2 1323 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 TCHHQ07283 1943 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 SSU72P8A0A1W2PR75 194 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 MIF4GDA9UHW6 222 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 SCNN1GP51170 649 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 CRYBB1P53674 252 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 GTF2BQ00403 316 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 TFDP2Q14188 446 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 NCAPHQ15003 741 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 TRIP13Q15645 432 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 GOLGA7BQ2TAP0 167 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 ARSHQ5FYA8 562 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 ADGRF2Q8IZF7 708 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 DNAAF3Q8N9W5 541 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 CYFIP2Q96F07 1278 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 CCT8L2Q96SF2 557 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 BCAS3Q9H6U6 928 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 DONSONQ9NYP3 566 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 NAGPAQ9UK23 515 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 PACSIN2Q9UNF0 486 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 CIB2O75838 187 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 ZBED1O96006 694 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 SLC4A1P02730 911 aa11.22□□□□□ -0.61
CARMIL3-202ENST00000559694 RAP1GAPP47736 663 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms