RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 UBN1Q9NPG3 1134 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 CHORDC1Q9UHD1 332 aaPredicted RBP18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 ATMINO43313 823 aaPredicted RBP18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 KIF4AO95239 1232 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 P4HA1P13674 534 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 RAG1P15918 1043 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 LMO2P25791 158 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 BRCC3P46736 316 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 DSC1Q08554 894 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 SV2CQ496J9 727 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 VPS36Q86VN1 386 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 PDCL2Q8N4E4 241 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 GDAP2Q9NXN4 497 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 TIMM13Q9Y5L4 95 aaPredicted RBP18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 UPP2O95045 317 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 CD19P15391 556 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 ABCB4P21439 1286 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 ANXA13P27216 316 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 PNPLA4P41247 253 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 GALCP54803 685 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 DEFB103AP81534 67 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 PTPN14Q15678 1187 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 TIGD5Q53EQ6 642 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 LLGL2Q6P1M3 1020 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 CNKSR3Q6P9H4 555 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 LIMS2Q7Z4I7 341 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 C12orf29Q8N999 325 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 ARHGEF26Q96DR7 871 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 CYFIP2Q96F07 1278 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 ELAC1Q9H777 363 aaKnown RBP18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 BARX2Q9UMQ3 279 aaPredicted RBP18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 PCDHB7Q9Y5E2 793 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 CAPN6Q9Y6Q1 641 aa18.47■□□□□ 0.55
CHRNA3-206ENST00000559658 CCP110O43303 1012 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 TNNT1P13805 278 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 PBX3P40426 434 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 NAA35Q5VZE5 725 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 WSCD1Q658N2 575 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 DPH6Q7L8W6 267 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 ACOT1Q86TX2 421 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 COLGALT2Q8IYK4 626 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 CPA5Q8WXQ8 436 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 FAXDC2Q96IV6 333 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 THAP2Q9H0W7 228 aa18.46■□□□□ 0.55
CHRNA3-206ENST00000559658 CYB561D2O14569 222 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 PJA2O43164 708 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 B3GAT3O94766 335 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 PARNO95453 639 aaKnown RBP18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 UNGP13051 313 aaPredicted RBP18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 YWHAEP62258 255 aaKnown RBP18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 CLEC16AQ2KHT3 1053 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 SYT10Q6XYQ8 523 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 ADGRF2Q8IZF7 708 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 OR6B3Q8NGW1 331 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 TMEM176AQ96HP8 235 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 SENP8Q96LD8 212 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 LRFN2Q9ULH4 789 aa18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 PRG3Q9Y2Y8 225 aaPredicted RBP18.46■□□□□ 0.54
CHRNA3-206ENST00000559658 BUB1O43683 1085 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 MOCS3O95396 460 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 FTLP02792 175 aaPredicted RBP18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 PDGFRBP09619 1106 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 ACAT1P24752 427 aaKnown RBP18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 AARSP49588 968 aaKnown RBP eCLIP18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 BPIFB4P59827 614 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 NOMO3P69849 1222 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 KIAA0319Q5VV43 1072 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 DENND1BQ6P3S1 775 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 APPL2Q8NEU8 664 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 FAM49BQ9NUQ9 324 aa18.45■□□□□ 0.54
CHRNA3-206ENST00000559658 VWA8A3KMH1 1905 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 MYH10P35580 1976 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 CYP1A1P04798 512 aaPredicted RBP18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 RPL9P32969 192 aaKnown RBP18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 PSMC1P62191 440 aaKnown RBP18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 RNASELQ05823 741 aaKnown RBP18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 KIF5AQ12840 1032 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 FAM117BQ6P1L5 589 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 C16orf59Q7L2K0 433 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 PHLDB2Q86SQ0 1253 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 NPAS4Q8IUM7 802 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 C7orf61Q8IZ16 206 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 C1orf131Q8NDD1 294 aaKnown RBP18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 URGCPQ8TCY9 931 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 ISCUQ9H1K1 167 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 NRDE2Q9H7Z3 1164 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 CYTH4Q9UIA0 394 aa18.44■□□□□ 0.54
CHRNA3-206ENST00000559658 GOLGA6L9A6NEM1 432 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 TBKBP1A7MCY6 615 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 ATP2C2O75185 946 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 H2AFZP0C0S5 128 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 RFC2P35250 354 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 EPHB4P54760 987 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 GNG11P61952 73 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 IKBKEQ14164 716 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 ZNF662Q6ZS27 426 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 H2AFVQ71UI9 128 aa18.43■□□□□ 0.54
CHRNA3-206ENST00000559658 ZNF677Q86XU0 584 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms