RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 TICRRQ7Z2Z1 1910 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 ANHXE9PGG2 379 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
SPG11-216ENST00000559347 KRT19P08727 400 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 CEBPBP17676 345 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 PTPN2P17706 415 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 CYP24A1Q07973 514 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 TWF1Q12792 350 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 BFSP1Q12934 665 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 SLC39A12Q504Y0 691 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 WSCD1Q658N2 575 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 METTL23Q86XA0 190 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 FBXL6Q8N531 539 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 RDH13Q8NBN7 331 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 ING5Q8WYH8 240 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 FGF14Q92915 247 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 NXPE3Q969Y0 559 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 MFSD14AQ96MC6 490 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 CGRRF1Q99675 332 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 ZCWPW1Q9H0M4 648 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
SPG11-216ENST00000559347 DNAJC25Q9H1X3 360 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 CEP72Q9P209 647 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 L1RE1Q9UN81 338 aa11.79□□□□□ -0.52
SPG11-216ENST00000559347 HELZP42694 1942 aaKnown RBP11.79□□□□□ -0.52
SPG11-216ENST00000559347 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 RHOBTB3O94955 611 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 ZNF202O95125 648 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 TNNC2P02585 160 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 DLATP10515 647 aaKnown RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 CCR2P41597 374 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 EPHA5P54756 1037 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 RBP5P82980 135 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 DUSP4Q13115 394 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 PLD1Q13393 1074 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 PSMD6Q15008 389 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 CENPPQ6IPU0 288 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 PARM1Q6UWI2 310 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 MTSS1LQ765P7 747 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 PDZD4Q76G19 769 aaPredicted RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 SUGP1Q8IWZ8 645 aaKnown RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 ELMOD1Q8N336 334 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 PDCL2Q8N4E4 241 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 CSGALNACT2Q8N6G5 542 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 ST13P5Q8NFI4 369 aaPredicted RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 GOLGA5Q8TBA6 731 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 TCEAL4Q96EI5 215 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 KCTD10Q9H3F6 313 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 GDAP2Q9NXN4 497 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 HSFX1Q9UBD0 423 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 MRPS23Q9Y3D9 190 aaKnown RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 PATJQ8NI35 1801 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 VPS13AQ96RL7 3174 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 ANAPC1Q9H1A4 1944 aa11.78□□□□□ -0.52
SPG11-216ENST00000559347 ZNF638Q14966 1978 aaKnown RBP11.78□□□□□ -0.52
SPG11-216ENST00000559347 PDXKO00764 312 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 EXOC3O60645 756 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 HUS1O60921 280 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 SOAT2O75908 522 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 SRFP11831 508 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 ATF6P18850 670 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 TNNI1P19237 187 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 VCPP55072 806 aaKnown RBP11.77□□□□□ -0.53
SPG11-216ENST00000559347 MYO1EQ12965 1108 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 KCNB1Q14721 858 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 DUOXA2Q1HG44 320 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 IQCEQ6IPM2 695 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 TRAPPC11Q7Z392 1133 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 TMC8Q8IU68 726 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 ADGRF2Q8IZF7 708 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 FMR1NBQ8N0W7 255 aaPredicted RBP11.77□□□□□ -0.53
SPG11-216ENST00000559347 THEM5Q8N1Q8 247 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 TMEM86AQ8N2M4 240 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 SLC44A3Q8N4M1 653 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 TOP6BLQ8N6T0 577 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 ATAD1Q8NBU5 361 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 LEMD2Q8NC56 503 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 SPATA18Q8TC71 538 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 ZNF512Q96ME7 567 aaPredicted RBP11.77□□□□□ -0.53
SPG11-216ENST00000559347 FNBP1Q96RU3 617 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 ASAH2Q9NR71 780 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 GDE1Q9NZC3 331 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 SNX9Q9Y5X1 595 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 MYO15AQ9UKN7 3530 aa11.77□□□□□ -0.53
SPG11-216ENST00000559347 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
SPG11-216ENST00000559347 MOSPD3O75425 235 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 MICAL2O94851 1124 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 CFHP08603 1231 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 FCARP24071 287 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 SMARCB1Q12824 385 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 CWF19L1Q69YN2 538 aaKnown RBP11.76□□□□□ -0.53
SPG11-216ENST00000559347 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 LRRTM3Q86VH5 581 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 OSTM1Q86WC4 334 aa11.76□□□□□ -0.53
SPG11-216ENST00000559347 SLC9A9Q8IVB4 645 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms