RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ZNF606Q8WXB4 792 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
SPG11-215ENST00000559193 PAIP2Q9BPZ3 127 aaKnown RBP17.53■□□□□ 0.4
SPG11-215ENST00000559193 MSTO1Q9BUK6 570 aa17.53■□□□□ 0.4
SPG11-215ENST00000559193 SIP14410 1827 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 TCRBV5S1A1TA0A578 114 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 LRRIQ4A6NIV6 560 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 EGFRP00533 1210 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 SUPT20HL2P0C7V6 817 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 CCNB1P14635 433 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 OGDHQ02218 1023 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 CCDC15Q0P6D6 951 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 GPS1Q13098 491 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 NR1H3Q13133 447 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 SUPT20HL1Q3ZLR7 823 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 TXNRD3NBQ6F5E7 133 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 PPP1R2P3Q6NXS1 205 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 SPOCD1Q6ZMY3 1216 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 SPOCK2Q92563 424 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 KCNN1Q92952 543 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 TTC25Q96NG3 672 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 MCEEQ96PE7 176 aa17.52■□□□□ 0.4
SPG11-215ENST00000559193 A0A0B4J269 797 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 F8VP50 259 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 POC1B-GALNT4F8VUJ3 575 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 MAGEB2O15479 319 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 PRPF4O43172 522 aaKnown RBP eCLIP17.52■□□□□ 0.39
SPG11-215ENST00000559193 TJP3O95049 919 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 MCL1Q07820 350 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 NCOA4Q13772 614 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 PKN2Q16513 984 aaKnown RBP17.52■□□□□ 0.39
SPG11-215ENST00000559193 SEZ6Q53EL9 994 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 ACSF2Q96CM8 615 aaPredicted RBP17.52■□□□□ 0.39
SPG11-215ENST00000559193 PORCNQ9H237 461 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 TRABDQ9H4I3 376 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 UBN1Q9NPG3 1134 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 FBXO40Q9UH90 709 aa17.52■□□□□ 0.39
SPG11-215ENST00000559193 ADGRA2Q96PE1 1338 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 SRCAPQ6ZRS2 3230 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 DNAJC3Q13217 504 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 OASLQ15646 514 aaKnown RBP17.51■□□□□ 0.39
SPG11-215ENST00000559193 SLFN12LQ6IEE8 588 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 DEPTORQ8TB45 409 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 HAUS1Q96CS2 278 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 GINM1Q9NU53 330 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 GRID1Q9ULK0 1009 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 COL11A1P12107 1806 aaPredicted RBP17.51■□□□□ 0.39
SPG11-215ENST00000559193 hCG_1818297A0A087WSY0 165 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 K7ERI5 159 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 SKIV2L2P42285 1042 aaKnown RBP17.51■□□□□ 0.39
SPG11-215ENST00000559193 NAMPTP43490 491 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 SP2Q02086 613 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 MORF4L2Q15014 288 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 RNASEH2BQ5TBB1 312 aaKnown RBP17.51■□□□□ 0.39
SPG11-215ENST00000559193 LRRC38Q5VT99 294 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 CAPN12Q6ZSI9 719 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 DHX33Q9H6R0 707 aaKnown RBP17.51■□□□□ 0.39
SPG11-215ENST00000559193 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
SPG11-215ENST00000559193 STK38LQ9Y2H1 464 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 STARD13Q9Y3M8 1113 aa17.51■□□□□ 0.39
SPG11-215ENST00000559193 SPATA31C2B4DYI2 1134 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 UNC5CO95185 931 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 LDHAP00338 332 aaKnown RBP17.5■□□□□ 0.39
SPG11-215ENST00000559193 ARL2P36404 184 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 MSH2P43246 934 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 VCPP55072 806 aaKnown RBP17.5■□□□□ 0.39
SPG11-215ENST00000559193 MYO1EQ12965 1108 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 WDR72Q3MJ13 1102 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 C4orf33Q8N1A6 199 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 THOC1Q96FV9 657 aaKnown RBP17.5■□□□□ 0.39
SPG11-215ENST00000559193 CDHR1Q96JP9 859 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 VPS37BQ9H9H4 285 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 DRG1Q9Y295 367 aaKnown RBP17.5■□□□□ 0.39
SPG11-215ENST00000559193 BRD2P25440 801 aaKnown RBP17.5■□□□□ 0.39
SPG11-215ENST00000559193 PTPN7P35236 360 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 DNAJC24Q6P3W2 148 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 MYLK2Q9H1R3 596 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 SLCO1B3Q9NPD5 702 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 CYP39A1Q9NYL5 469 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 KCNG1Q9UIX4 513 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 PHTF1Q9UMS5 762 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 RLFQ13129 1914 aa17.5■□□□□ 0.39
SPG11-215ENST00000559193 A0A1B0GUA9 196 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 ALOX15BO15296 676 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 ANP32DO95626 131 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 OATP04181 439 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 CALB1P05937 261 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
SPG11-215ENST00000559193 SLC18A1P54219 525 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 BACE1P56817 501 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 TGFB2P61812 414 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 MOGSQ13724 837 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 SPARCL1Q14515 664 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 RGS9BPQ6ZS82 235 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 ZBED8Q8IZ13 594 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 NKD2Q969F2 451 aaPredicted RBP17.49■□□□□ 0.39
SPG11-215ENST00000559193 C15orf41Q9Y2V0 281 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 BANF1O75531 89 aa17.49■□□□□ 0.39
SPG11-215ENST00000559193 CST3P01034 146 aaPredicted RBP17.49■□□□□ 0.39
SPG11-215ENST00000559193 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms