RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 PJA1Q8NG27 643 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 SHKBP1Q8TBC3 707 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 ZSWIM3Q96MP5 696 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
SMAD6-203ENST00000558937 ZCWPW1Q9H0M4 648 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 ZFP14Q9HCL3 533 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 KANSL1LA0AUZ9 987 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 KPNA7A9QM74 516 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 ITGB3P05106 788 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 PNPLA4P41247 253 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 CDR1P51861 262 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 GRM2Q14416 872 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 THEM5Q8N1Q8 247 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 GPD1LQ8N335 351 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 ZNF334Q9HCZ1 680 aaPredicted RBP16.29■□□□□ 0.2
SMAD6-203ENST00000558937 HSFX1Q9UBD0 423 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
SMAD6-203ENST00000558937 NCANO14594 1321 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 TICRRQ7Z2Z1 1910 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 A0A1W2PRU2 124 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 KIAA0391O15091 583 aaKnown RBP16.28■□□□□ 0.2
SMAD6-203ENST00000558937 EIF3DO15371 548 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMAD6-203ENST00000558937 GLULP15104 373 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 HOXD13P35453 343 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 VIPR2P41587 438 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 AMPD3Q01432 767 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 BFSP1Q12934 665 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 UBXN2BQ14CS0 331 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 FAM26FQ5R3K3 315 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 SCARA3Q6AZY7 606 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 VITQ6UXI7 678 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 TPRG1Q6ZUI0 275 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 LRRTM3Q86VH5 581 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 CXorf38Q8TB03 319 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 ZSCAN18Q8TBC5 510 aaPredicted RBP16.28■□□□□ 0.2
SMAD6-203ENST00000558937 CACTINQ8WUQ7 758 aaKnown RBP16.28■□□□□ 0.2
SMAD6-203ENST00000558937 DNASE1L2Q92874 299 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 PSMG2Q969U7 264 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 SEPT5Q99719 369 aaPredicted RBP16.28■□□□□ 0.2
SMAD6-203ENST00000558937 C7orf25Q9BPX7 421 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 SLITRK6Q9H5Y7 841 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 MAGEF1Q9HAY2 307 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 LTB4R2Q9NPC1 389 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 PCDHA7Q9UN72 937 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 ASB3Q9Y575 518 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 NUP210Q8TEM1 1887 aaPredicted RBP16.28■□□□□ 0.2
SMAD6-203ENST00000558937 PATJQ8NI35 1801 aa16.28■□□□□ 0.2
SMAD6-203ENST00000558937 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.2
SMAD6-203ENST00000558937 TMEM191BP0C7N4 346 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 ATF6P18850 670 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 CASP1P29466 404 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 ME1P48163 572 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 MGAT5BQ3V5L5 792 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 LMBRD2Q68DH5 695 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-203ENST00000558937 UNC13DQ70J99 1090 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 EPM2AIP1Q7L775 607 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-203ENST00000558937 ASCL5Q7RTU5 278 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 DNAJB7Q7Z6W7 309 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-203ENST00000558937 LRRC52Q8N7C0 313 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.2
SMAD6-203ENST00000558937 LPIN3Q9BQK8 851 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 TRMT61BQ9BVS5 477 aaKnown RBP16.27■□□□□ 0.2
SMAD6-203ENST00000558937 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 BRD9Q9H8M2 597 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 TRPV4Q9HBA0 871 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 HEBP1Q9NRV9 189 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 ITGA11Q9UKX5 1188 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 L1RE1Q9UN81 338 aa16.27■□□□□ 0.2
SMAD6-203ENST00000558937 MTF2Q9Y483 593 aaPredicted RBP16.27■□□□□ 0.2
SMAD6-203ENST00000558937 PTPRJQ12913 1337 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 KRT19P08727 400 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 HAPLN1P10915 354 aaPredicted RBP16.26■□□□□ 0.19
SMAD6-203ENST00000558937 PSMC3P17980 439 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 CD72P21854 359 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 GDI1P31150 447 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 TUFMP49411 452 aaKnown RBP16.26■□□□□ 0.19
SMAD6-203ENST00000558937 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
SMAD6-203ENST00000558937 EHHADHQ08426 723 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 SMARCB1Q12824 385 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 VEPH1Q14D04 833 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 STXBP5Q5T5C0 1151 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 RESP18Q5W5W9 173 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 GAREM2Q75VX8 874 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 ITIH5Q86UX2 942 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 CBWD2Q8IUF1 395 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 DCP1BQ8IZD4 617 aaKnown RBP16.26■□□□□ 0.19
SMAD6-203ENST00000558937 PDCL2Q8N4E4 241 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 FAM200AQ8TCP9 573 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 SPPL2BQ8TCT7 592 aa16.26■□□□□ 0.19
SMAD6-203ENST00000558937 DEPDC1BQ8WUY9 529 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms